RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 HAS3O00219 553 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 DDX3YO15523 660 aaKnown RBP22.74■■□□□ 1.23
ATG4D-201ENST00000309469 CTGFP29279 349 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 PSEN2P49810 448 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 ZNF132P52740 706 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 ZNF699Q32M78 642 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 BEND6Q5SZJ8 279 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-201ENST00000309469 KRT222Q8N1A0 295 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 NUP85Q9BW27 656 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 ASB7Q9H672 318 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 UVRAGQ9P2Y5 699 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 GPR32O75388 356 aa22.73■■□□□ 1.23
ATG4D-201ENST00000309469 MYL3P08590 195 aa22.73■■□□□ 1.23
ATG4D-201ENST00000309469 NFICP08651 508 aa22.73■■□□□ 1.23
ATG4D-201ENST00000309469 TMEM62Q0P6H9 643 aa22.73■■□□□ 1.23
ATG4D-201ENST00000309469 SLC10A6Q3KNW5 377 aa22.73■■□□□ 1.23
ATG4D-201ENST00000309469 TRIM72Q6ZMU5 477 aa22.73■■□□□ 1.23
ATG4D-201ENST00000309469 ZIC5Q96T25 663 aa22.73■■□□□ 1.23
ATG4D-201ENST00000309469 GCOM2Q9BZD3 368 aaPredicted RBP22.73■■□□□ 1.23
ATG4D-201ENST00000309469 CNOT8Q9UFF9 292 aaKnown RBP22.73■■□□□ 1.23
ATG4D-201ENST00000309469 CA12O43570 354 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 TBC1D8O95759 1140 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 CYP2C9P11712 490 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 FGFR4P22455 802 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 BEX3Q00994 111 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 JADE1Q6IE81 842 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 MCOLN2Q8IZK6 566 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 RASGEF1CQ8N431 466 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 ZNF564Q8TBZ8 553 aaPredicted RBP22.72■■□□□ 1.23
ATG4D-201ENST00000309469 CPA5Q8WXQ8 436 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 CYFIP2Q96F07 1278 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 ADPGKQ9BRR6 497 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 TMEM59LQ9UK28 342 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 ADAM17P78536 824 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 CENPCQ03188 943 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 HIC1Q14526 733 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 MESDQ14696 234 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 GLE1Q53GS7 698 aaKnown RBP22.72■■□□□ 1.23
ATG4D-201ENST00000309469 NAA35Q5VZE5 725 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 SMYD5Q6GMV2 418 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 C1orf127Q8N9H9 656 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 HDAC7Q8WUI4 952 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 RPS6KC1Q96S38 1066 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.72■■□□□ 1.23
ATG4D-201ENST00000309469 CISHQ9NSE2 258 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 SIX4Q9UIU6 781 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 GINS2Q9Y248 185 aa22.72■■□□□ 1.23
ATG4D-201ENST00000309469 PGRMC1O00264 195 aaKnown RBP22.71■■□□□ 1.23
ATG4D-201ENST00000309469 THAP12O43422 761 aa22.71■■□□□ 1.23
ATG4D-201ENST00000309469 CFHP08603 1231 aa22.71■■□□□ 1.23
ATG4D-201ENST00000309469 KRT19P08727 400 aa22.71■■□□□ 1.23
ATG4D-201ENST00000309469 CD58P19256 250 aa22.71■■□□□ 1.23
ATG4D-201ENST00000309469 NSFP46459 744 aaKnown RBP22.71■■□□□ 1.23
ATG4D-201ENST00000309469 RUFY4Q6ZNE9 571 aa22.71■■□□□ 1.23
ATG4D-201ENST00000309469 TRIM11Q96F44 468 aa22.71■■□□□ 1.23
ATG4D-201ENST00000309469 ACAP3Q96P50 834 aa22.71■■□□□ 1.23
ATG4D-201ENST00000309469 FUT8Q9BYC5 575 aa22.71■■□□□ 1.23
ATG4D-201ENST00000309469 CDHR5Q9HBB8 845 aa22.71■■□□□ 1.23
ATG4D-201ENST00000309469 DOCK3Q8IZD9 2030 aa22.71■■□□□ 1.23
ATG4D-201ENST00000309469 TMEM110-MUSTN1A8MSY1 372 aa22.7■■□□□ 1.23
ATG4D-201ENST00000309469 ZMYND10O75800 440 aa22.7■■□□□ 1.23
ATG4D-201ENST00000309469 WEE2P0C1S8 567 aa22.7■■□□□ 1.23
ATG4D-201ENST00000309469 MYBL1P10243 752 aa22.7■■□□□ 1.23
ATG4D-201ENST00000309469 ASPAP45381 313 aa22.7■■□□□ 1.23
ATG4D-201ENST00000309469 C8orf74Q6P047 294 aa22.7■■□□□ 1.23
ATG4D-201ENST00000309469 ZNF606Q8WXB4 792 aa22.7■■□□□ 1.23
ATG4D-201ENST00000309469 RUBCNQ92622 972 aa22.7■■□□□ 1.23
ATG4D-201ENST00000309469 AVENQ9NQS1 362 aaPredicted RBP22.7■■□□□ 1.23
ATG4D-201ENST00000309469 DMGDHQ9UI17 866 aaKnown RBP22.7■■□□□ 1.23
ATG4D-201ENST00000309469 MIF4GDA9UHW6 222 aaKnown RBP22.7■■□□□ 1.22
ATG4D-201ENST00000309469 AKR1A1P14550 325 aa22.7■■□□□ 1.22
ATG4D-201ENST00000309469 COMTP21964 271 aa22.7■■□□□ 1.22
ATG4D-201ENST00000309469 FSCN1Q16658 493 aaKnown RBP22.7■■□□□ 1.22
ATG4D-201ENST00000309469 CARD9Q9H257 536 aa22.7■■□□□ 1.22
ATG4D-201ENST00000309469 TTC7AQ9ULT0 858 aaPredicted RBP22.7■■□□□ 1.22
ATG4D-201ENST00000309469 L1RE1Q9UN81 338 aa22.7■■□□□ 1.22
ATG4D-201ENST00000309469 NOC2LQ9Y3T9 749 aaKnown RBP22.7■■□□□ 1.22
ATG4D-201ENST00000309469 MROH7Q68CQ1 1323 aa22.7■■□□□ 1.22
ATG4D-201ENST00000309469 SASH3O75995 380 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 HOXA11P31270 313 aaPredicted RBP22.69■■□□□ 1.22
ATG4D-201ENST00000309469 GRM5P41594 1212 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 NOMO3P69849 1222 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 MRPS25P82663 173 aaKnown RBP22.69■■□□□ 1.22
ATG4D-201ENST00000309469 DCAF4L1Q3SXM0 396 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 SCARA5Q6ZMJ2 495 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 CCNI2Q6ZMN8 369 aaPredicted RBP22.69■■□□□ 1.22
ATG4D-201ENST00000309469 CATSPER4Q7RTX7 472 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 PASD1Q8IV76 773 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 KATNAL1Q9BW62 490 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 NXF1Q9UBU9 619 aaKnown RBP22.69■■□□□ 1.22
ATG4D-201ENST00000309469 ITGB3P05106 788 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 DARSP14868 501 aaKnown RBP22.69■■□□□ 1.22
ATG4D-201ENST00000309469 YWHAEP62258 255 aaKnown RBP22.69■■□□□ 1.22
ATG4D-201ENST00000309469 TNNC1P63316 161 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 SLC7A5Q01650 507 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 PCBP1Q15365 356 aaKnown RBP eCLIP22.69■■□□□ 1.22
ATG4D-201ENST00000309469 ZNF667Q5HYK9 610 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 DCAF12L1Q5VU92 463 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 MON1BQ7L1V2 547 aa22.69■■□□□ 1.22
ATG4D-201ENST00000309469 APBB1IPQ7Z5R6 666 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms