RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CCNI2Q6ZMN8 369 aaPredicted RBP16.78■□□□□ 0.28
USP42-201ENST00000306177 RAET1EQ8TD07 263 aa16.78■□□□□ 0.28
USP42-201ENST00000306177 DDX50Q9BQ39 737 aaKnown RBP16.78■□□□□ 0.28
USP42-201ENST00000306177 RBM12Q9NTZ6 932 aaKnown RBP16.78■□□□□ 0.28
USP42-201ENST00000306177 FARP1Q9Y4F1 1045 aaPredicted RBP16.78■□□□□ 0.28
USP42-201ENST00000306177 H0Y3Z8 333 aa16.77■□□□□ 0.28
USP42-201ENST00000306177 SESN2P58004 480 aaPredicted RBP16.77■□□□□ 0.28
USP42-201ENST00000306177 CDR2Q01850 454 aa16.77■□□□□ 0.28
USP42-201ENST00000306177 GRB10Q13322 594 aa16.77■□□□□ 0.28
USP42-201ENST00000306177 UBA6A0AVT1 1052 aaPredicted RBP16.77■□□□□ 0.28
USP42-201ENST00000306177 CFAP69A5D8W1 941 aa16.77■□□□□ 0.28
USP42-201ENST00000306177 CCDC22O60826 627 aa16.77■□□□□ 0.28
USP42-201ENST00000306177 COMTP21964 271 aa16.77■□□□□ 0.28
USP42-201ENST00000306177 GPRC5AQ8NFJ5 357 aa16.77■□□□□ 0.28
USP42-201ENST00000306177 RMDN1Q96DB5 314 aa16.77■□□□□ 0.28
USP42-201ENST00000306177 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
USP42-201ENST00000306177 SMG5Q9UPR3 1016 aaKnown RBP16.77■□□□□ 0.28
USP42-201ENST00000306177 C3orf67Q6ZVT6 689 aa16.77■□□□□ 0.27
USP42-201ENST00000306177 PPHLN1Q8NEY8 458 aaKnown RBP16.77■□□□□ 0.27
USP42-201ENST00000306177 DACT3Q96B18 629 aaPredicted RBP16.77■□□□□ 0.27
USP42-201ENST00000306177 STOML1Q9UBI4 398 aa16.77■□□□□ 0.27
USP42-201ENST00000306177 C3orf70A6NLC5 250 aaPredicted RBP16.77■□□□□ 0.27
USP42-201ENST00000306177 CTSHP09668 335 aa16.77■□□□□ 0.27
USP42-201ENST00000306177 LRRC71Q8N4P6 559 aa16.77■□□□□ 0.27
USP42-201ENST00000306177 NRBF2Q96F24 287 aa16.77■□□□□ 0.27
USP42-201ENST00000306177 EGFL8Q99944 293 aa16.77■□□□□ 0.27
USP42-201ENST00000306177 AGPAT3Q9NRZ7 376 aa16.77■□□□□ 0.27
USP42-201ENST00000306177 TBX20Q9UMR3 447 aa16.77■□□□□ 0.27
USP42-201ENST00000306177 CDH16O75309 829 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 PDCD2Q16342 344 aaPredicted RBP16.76■□□□□ 0.27
USP42-201ENST00000306177 ACCSLQ4AC99 568 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 ANKRD13AQ8IZ07 590 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 PSMD3O43242 534 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 APRTP07741 180 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 GUCY1A3Q02108 690 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 CACNB2Q08289 660 aaPredicted RBP16.76■□□□□ 0.27
USP42-201ENST00000306177 SMAD1Q15797 465 aaKnown RBP16.76■□□□□ 0.27
USP42-201ENST00000306177 TEDDM1Q5T9Z0 273 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 TAS2R42Q7RTR8 314 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 LCA5Q86VQ0 697 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 OSBPL8Q9BZF1 889 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 MOSPD1Q9UJG1 213 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 TCRBV5S4A2TA0A5A2 114 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 ANP32DO95626 131 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 PDGFRBP09619 1106 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 ACADSBP45954 432 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 EFTUD2Q15029 972 aaKnown RBP eCLIP16.76■□□□□ 0.27
USP42-201ENST00000306177 SV2CQ496J9 727 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 ST13P4Q8IZP2 240 aaPredicted RBP16.76■□□□□ 0.27
USP42-201ENST00000306177 ANKS1AQ92625 1134 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 FOXP3Q9BZS1 431 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 ETNK1Q9HBU6 452 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 HADHAP40939 763 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 EHD4Q9H223 541 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 RAB6BQ9NRW1 208 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 NEU2Q9Y3R4 380 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 ALG6Q9Y672 507 aa16.76■□□□□ 0.27
USP42-201ENST00000306177 RPS6KA5O75582 802 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 PPP1R37O75864 691 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 TMCC1O94876 653 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 CETPP11597 493 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 MUTP22033 750 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 DEFB132Q7Z7B7 95 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 JAMLQ86YT9 394 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 RNF135Q8IUD6 432 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 ZKSCAN4Q969J2 545 aaPredicted RBP16.75■□□□□ 0.27
USP42-201ENST00000306177 RUSC1Q9BVN2 902 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 ECT2Q9H8V3 914 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 MROH1Q8NDA8 1641 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 GAS2O43903 313 aaKnown RBP16.75■□□□□ 0.27
USP42-201ENST00000306177 CYP2C9P11712 490 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 IL1R1P14778 569 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 ARHGDIAP52565 204 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 LAMC2Q13753 1193 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 GPAT2Q6NUI2 795 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 TARS2Q9BW92 718 aaKnown RBP16.75■□□□□ 0.27
USP42-201ENST00000306177 WWP1Q9H0M0 922 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 PPCSQ9HAB8 311 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 ANLNQ9NQW6 1124 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 NDE1Q9NXR1 346 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.75■□□□□ 0.27
USP42-201ENST00000306177 ESRRBO95718 433 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 KLRC1P26715 233 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 MDH1P40925 334 aaKnown RBP16.75■□□□□ 0.27
USP42-201ENST00000306177 TMEM62Q0P6H9 643 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 TADA2AO75478 443 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 ITGA4P13612 1032 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 TOB1P50616 345 aaPredicted RBP16.75■□□□□ 0.27
USP42-201ENST00000306177 DGKDQ16760 1214 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 TTC23LQ6PF05 361 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 TRIM54Q9BYV2 358 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 RSAD1Q9HA92 442 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 PIDD1Q9HB75 910 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 ZFYVE28Q9HCC9 887 aa16.75■□□□□ 0.27
USP42-201ENST00000306177 ZC3H7BQ9UGR2 993 aaKnown RBP16.75■□□□□ 0.27
USP42-201ENST00000306177 CCL15-CCL14A0A0B4J2E2 113 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 CFAP73A6NFT4 308 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 RRN3P2A6NIE6 340 aa16.74■□□□□ 0.27
USP42-201ENST00000306177 TCF7P36402 384 aaPredicted RBP16.74■□□□□ 0.27
USP42-201ENST00000306177 CCL15Q16663 113 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms