RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 USP37Q86T82 979 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 TMEM173Q86WV6 379 aaPredicted RBP16.4■□□□□ 0.22
UBXN1-202ENST00000301935 UBALD2Q8IYN6 164 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 TRAIPQ9BWF2 469 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 ZBP1Q9H171 429 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 IRF2BPLQ9H1B7 796 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 PTPRHQ9HD43 1115 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 AGPAT5Q9NUQ2 364 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 HSPBP1Q9NZL4 362 aa16.4■□□□□ 0.22
UBXN1-202ENST00000301935 AGO2Q9UKV8 859 aaKnown RBP16.4■□□□□ 0.22
UBXN1-202ENST00000301935 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.39■□□□□ 0.21
UBXN1-202ENST00000301935 LRRC10BA6NIK2 292 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 GFRA3O60609 400 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 EXOC3O60645 756 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 ZC3H11AO75152 810 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBXN1-202ENST00000301935 ZNF18P17022 549 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 ARF4P18085 180 aaPredicted RBP16.39■□□□□ 0.21
UBXN1-202ENST00000301935 ADSSP30520 456 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 MTHFRP42898 656 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 NUBP1P53384 320 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
UBXN1-202ENST00000301935 NOLC1Q14978 699 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBXN1-202ENST00000301935 KIAA1841Q6NSI8 718 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 SLC39A4Q6P5W5 647 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 SLC27A1Q6PCB7 646 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 GPD1LQ8N335 351 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 MSTO1Q9BUK6 570 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 DZANK1Q9NVP4 752 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 IRAK3Q9Y616 596 aa16.39■□□□□ 0.21
UBXN1-202ENST00000301935 CARNS1A5YM72 827 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 ZNF233A6NK53 670 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 OGTO15294 1046 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 EXTL3O43909 919 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 HOXA11P31270 313 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-202ENST00000301935 CYP2J2P51589 502 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 ZNF568Q3ZCX4 644 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 TCP11X2Q5H9J9 407 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 RARS2Q5T160 578 aaKnown RBP16.38■□□□□ 0.21
UBXN1-202ENST00000301935 FAM186BQ8IYM0 893 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 VPS52Q8N1B4 723 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 TDRD5Q8NAT2 981 aaKnown RBP16.38■□□□□ 0.21
UBXN1-202ENST00000301935 ATOH1Q92858 354 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-202ENST00000301935 LPPQ93052 612 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 CBWD1Q9BRT8 395 aa16.38■□□□□ 0.21
UBXN1-202ENST00000301935 SAMSN1Q9NSI8 373 aaKnown RBP16.38■□□□□ 0.21
UBXN1-202ENST00000301935 KCNJ18B7U540 433 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 H0Y858 1186 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 B4GALT5O43286 388 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 CXCL14O95715 111 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 TPM3P06753 285 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 WEE2P0C1S8 567 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 CTSAP10619 480 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 SKIP12755 728 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 KRT13P13646 458 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 MCCD1P59942 119 aaPredicted RBP16.37■□□□□ 0.21
UBXN1-202ENST00000301935 KCNJ12Q14500 433 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 SURF1Q15526 300 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 CCDC40Q4G0X9 1142 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 FILIP1LQ4L180 1135 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 CEP135Q66GS9 1140 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 TWF2Q6IBS0 349 aaKnown RBP16.37■□□□□ 0.21
UBXN1-202ENST00000301935 INTS8Q75QN2 995 aaKnown RBP16.37■□□□□ 0.21
UBXN1-202ENST00000301935 DDX53Q86TM3 631 aaKnown RBP16.37■□□□□ 0.21
UBXN1-202ENST00000301935 IRF2BP1Q8IU81 584 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 C12orf76Q8N812 135 aaPredicted RBP16.37■□□□□ 0.21
UBXN1-202ENST00000301935 AUTS2Q8WXX7 1259 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 IGSF21Q96ID5 467 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 CNOT6LQ96LI5 555 aaKnown RBP16.37■□□□□ 0.21
UBXN1-202ENST00000301935 SMOC2Q9H3U7 446 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 PCIF1Q9H4Z3 704 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 PDZD7Q9H5P4 517 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 GRPEL1Q9HAV7 217 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 FAM105AQ9NUU6 356 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 TBC1D13Q9NVG8 400 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 ANKFY1Q9P2R3 1169 aa16.37■□□□□ 0.21
UBXN1-202ENST00000301935 ARMCX3Q9UH62 379 aaPredicted RBP16.37■□□□□ 0.21
UBXN1-202ENST00000301935 LIMA1Q9UHB6 759 aaKnown RBP16.37■□□□□ 0.21
UBXN1-202ENST00000301935 PIN4Q9Y237 131 aaKnown RBP16.37■□□□□ 0.21
UBXN1-202ENST00000301935 MEIS3P2A8K0S8 358 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 ABLIM1O14639 778 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 CBFA2T2O43439 604 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 GALR2O43603 387 aaPredicted RBP16.36■□□□□ 0.21
UBXN1-202ENST00000301935 STX10O60499 249 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 AKAP3O75969 853 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 EDN1P05305 212 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 ASGR2P07307 311 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 CLTAP09496 248 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 EPCAMP16422 314 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 MTIF2P46199 727 aaKnown RBP16.36■□□□□ 0.21
UBXN1-202ENST00000301935 RAB27AP51159 221 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 SNRNP35Q16560 246 aaKnown RBP16.36■□□□□ 0.21
UBXN1-202ENST00000301935 SARM1Q6SZW1 724 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 GLB1LQ6UWU2 654 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 HACE1Q8IYU2 909 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 ZDHHC14Q8IZN3 488 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 BCL7CQ8WUZ0 217 aaPredicted RBP16.36■□□□□ 0.21
UBXN1-202ENST00000301935 ZBTB45Q96K62 511 aaPredicted RBP16.36■□□□□ 0.21
UBXN1-202ENST00000301935 TRIM6Q9C030 488 aaPredicted RBP16.36■□□□□ 0.21
UBXN1-202ENST00000301935 HSD3B7Q9H2F3 369 aa16.36■□□□□ 0.21
UBXN1-202ENST00000301935 NRDE2Q9H7Z3 1164 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms