RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SNW1Q13573 536 aaKnown RBP13.1□□□□□ -0.31
HMGB2-201ENST00000296503 KNOP1Q1ED39 458 aaKnown RBP13.1□□□□□ -0.31
HMGB2-201ENST00000296503 RTP2Q5QGT7 225 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 PRSS55Q6UWB4 352 aaPredicted RBP13.1□□□□□ -0.31
HMGB2-201ENST00000296503 TMEM184AQ6ZMB5 413 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 TMEM130Q8N3G9 435 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 C3orf58Q8NDZ4 430 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 ENGASEQ8NFI3 743 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 RXFP1Q9HBX9 757 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.1□□□□□ -0.312e-7■■□□□ 12.4
HMGB2-201ENST00000296503 SPTLC3Q9NUV7 552 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 TMEM63CQ9P1W3 806 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 FAM50BQ9Y247 325 aa13.1□□□□□ -0.31
HMGB2-201ENST00000296503 TCF20Q9UGU0 1960 aaKnown RBP13.09□□□□□ -0.31
HMGB2-201ENST00000296503 TEX28O15482 410 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 TGFB1I1O43294 461 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 GADD45BO75293 160 aaPredicted RBP13.09□□□□□ -0.31
HMGB2-201ENST00000296503 PRPF40AO75400 957 aaKnown RBP13.09□□□□□ -0.31
HMGB2-201ENST00000296503 LETM1O95202 739 aaPredicted RBP13.09□□□□□ -0.31
HMGB2-201ENST00000296503 EPCAMP16422 314 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 RPL17P18621 184 aaKnown RBP13.09□□□□□ -0.31
HMGB2-201ENST00000296503 SNRPFP62306 86 aaKnown RBP13.09□□□□□ -0.31
HMGB2-201ENST00000296503 KCNC3Q14003 757 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 SPATA1Q5VX52 437 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 ANKRD54Q6NXT1 300 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 CD300LGQ6UXG3 332 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 PALB2Q86YC2 1186 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 RDH13Q8NBN7 331 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 MSLNLQ96KJ4 702 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 APOL5Q9BWW9 433 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 AGPAT3Q9NRZ7 376 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 RBAKQ9NYW8 714 aaPredicted RBP13.09□□□□□ -0.31
HMGB2-201ENST00000296503 HSPBP1Q9NZL4 362 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 HOOK1Q9UJC3 728 aaKnown RBP13.09□□□□□ -0.31
HMGB2-201ENST00000296503 DERAQ9Y315 318 aa13.09□□□□□ -0.31
HMGB2-201ENST00000296503 GRXCR2A6NFK2 248 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 ZNF233A6NK53 670 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 TPM3P06753 285 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 NFICP08651 508 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 LRPAP1P30533 357 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 CYP2J2P51589 502 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 CREMQ03060 361 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 PNOCQ13519 176 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 PSMD5Q16401 504 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 BMT2Q1RMZ1 405 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 PDXDC1Q6P996 788 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 BRSK2Q8IWQ3 736 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 GPR65Q8IYL9 337 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 LNX1Q8TBB1 728 aaPredicted RBP13.08□□□□□ -0.32
HMGB2-201ENST00000296503 SLC22A17Q8WUG5 538 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 KIAA1586Q9HCI6 787 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 DPP3Q9NY33 737 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 FNIP2Q9P278 1114 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 C2CD2Q9Y426 696 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 MBTPS2O43462 519 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 RHOBTB3O94955 611 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 IL9P15248 144 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 HOXB8P17481 243 aaPredicted RBP13.08□□□□□ -0.32
HMGB2-201ENST00000296503 FGFR3P22607 806 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 TKTP29401 623 aaKnown RBP13.08□□□□□ -0.32
HMGB2-201ENST00000296503 CLCN4P51793 760 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 TFAMQ00059 246 aaKnown RBP13.08□□□□□ -0.32
HMGB2-201ENST00000296503 DSTYKQ6XUX3 929 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 ADAMTS19Q8TE59 1207 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 CACTINQ8WUQ7 758 aaKnown RBP13.08□□□□□ -0.32
HMGB2-201ENST00000296503 PIK3R5Q8WYR1 880 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 TIGD1Q96MW7 591 aa13.08□□□□□ -0.32
HMGB2-201ENST00000296503 CGNQ9P2M7 1197 aaKnown RBP13.08□□□□□ -0.32
HMGB2-201ENST00000296503 UNC80Q8N2C7 3258 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 KINO60870 393 aaKnown RBP13.07□□□□□ -0.32
HMGB2-201ENST00000296503 SMC2O95347 1197 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 GLUD1P00367 558 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 SPATA31D3P0C874 917 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 SMAD4Q13485 552 aaKnown RBP13.07□□□□□ -0.32
HMGB2-201ENST00000296503 KCNB1Q14721 858 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 TAF3Q5VWG9 929 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 SPATA31D4Q6ZUB0 917 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 NT5DC4Q86YG4 428 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 CBWD2Q8IUF1 395 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 XXYLT1Q8NBI6 393 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 GOLGA5Q8TBA6 731 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 FBXL18Q96ME1 805 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 COL25A1Q9BXS0 654 aaPredicted RBP13.07□□□□□ -0.32
HMGB2-201ENST00000296503 PDE11AQ9HCR9 933 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 MAPK8IP1Q9UQF2 711 aa13.07□□□□□ -0.32
HMGB2-201ENST00000296503 DLL1O00548 723 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 SYN3O14994 580 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 EXOC3O60645 756 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 SURF1Q15526 300 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 RARS2Q5T160 578 aaKnown RBP13.06□□□□□ -0.32
HMGB2-201ENST00000296503 C9orf57Q5W0N0 161 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 CES5AQ6NT32 575 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 SYCE2Q6PIF2 218 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 ELMSAN1Q6PJG2 1045 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 ANKS3Q6ZW76 656 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 EFCAB13Q8IY85 973 aa13.06□□□□□ -0.32
HMGB2-201ENST00000296503 C12orf76Q8N812 135 aaPredicted RBP13.06□□□□□ -0.32
HMGB2-201ENST00000296503 SMRP1Q8NCR6 262 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms