RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 NFIL3Q16649 462 aa20.26■□□□□ 0.83
PNKP-224ENST00000631020 EDRF1Q3B7T1 1238 aa20.26■□□□□ 0.83
PNKP-224ENST00000631020 SLC10A6Q3KNW5 377 aa20.26■□□□□ 0.83
PNKP-224ENST00000631020 C11orf57Q6ZUT1 292 aaPredicted RBP20.26■□□□□ 0.83
PNKP-224ENST00000631020 EEF2KMTQ96G04 330 aa20.26■□□□□ 0.83
PNKP-224ENST00000631020 FBXL18Q96ME1 805 aa20.26■□□□□ 0.83
PNKP-224ENST00000631020 ACAP3Q96P50 834 aa20.26■□□□□ 0.83
PNKP-224ENST00000631020 CCDC94Q9BW85 323 aaPredicted RBP20.26■□□□□ 0.83
PNKP-224ENST00000631020 GZF1Q9H116 711 aaPredicted RBP20.26■□□□□ 0.83
PNKP-224ENST00000631020 NRDE2Q9H7Z3 1164 aa20.26■□□□□ 0.83
PNKP-224ENST00000631020 ANO10Q9NW15 660 aa20.26■□□□□ 0.83
PNKP-224ENST00000631020 C5orf42Q9H799 3197 aa20.26■□□□□ 0.83
PNKP-224ENST00000631020 EXTL3O43909 919 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 ZC3H11AO75152 810 aaKnown RBP eCLIP20.25■□□□□ 0.83
PNKP-224ENST00000631020 CASP4P49662 377 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 RNASELQ05823 741 aaKnown RBP20.25■□□□□ 0.83
PNKP-224ENST00000631020 LRRC63Q05C16 580 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 SMC1AQ14683 1233 aaKnown RBP20.25■□□□□ 0.83
PNKP-224ENST00000631020 ENOX2Q16206 610 aaKnown RBP20.25■□□□□ 0.83
PNKP-224ENST00000631020 PLPP4Q5VZY2 271 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 ALKAL1Q6UXT8 129 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 TMC7Q7Z402 723 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 CBWD2Q8IUF1 395 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 GPD1LQ8N335 351 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 XXYLT1Q8NBI6 393 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 GSTCDQ8NEC7 633 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 ZFP42Q96MM3 310 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 GAD1Q99259 594 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 MIOSQ9NXC5 875 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 RWDD2AQ9UIY3 292 aa20.25■□□□□ 0.83
PNKP-224ENST00000631020 ARL5CA6NH57 179 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 PI4K2BG5E9Z4 385 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 KIAA0391O15091 583 aaKnown RBP20.24■□□□□ 0.83
PNKP-224ENST00000631020 LDHAP00338 332 aaKnown RBP20.24■□□□□ 0.83
PNKP-224ENST00000631020 GALTP07902 379 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 CXCL8P10145 99 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 NR2F2P24468 414 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 WNT7BP56706 349 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 ADAM9Q13443 819 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 MYBPC2Q14324 1141 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 DDX53Q86TM3 631 aaKnown RBP20.24■□□□□ 0.83
PNKP-224ENST00000631020 ZC3H3Q8IXZ2 948 aaKnown RBP20.24■□□□□ 0.83
PNKP-224ENST00000631020 HACE1Q8IYU2 909 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 MRPL43Q8N983 215 aaKnown RBP20.24■□□□□ 0.83
PNKP-224ENST00000631020 RDH13Q8NBN7 331 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 NOC3LQ8WTT2 800 aaKnown RBP20.24■□□□□ 0.83
PNKP-224ENST00000631020 IGSF21Q96ID5 467 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 TMEM175Q9BSA9 504 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 DNAJC25Q9H1X3 360 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 INPP5FQ9Y2H2 1132 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 GIT1Q9Y2X7 761 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 IRAK3Q9Y616 596 aa20.24■□□□□ 0.83
PNKP-224ENST00000631020 TTC26A0AVF1 554 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 PER2O15055 1255 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 EXOC3O60645 756 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 ADRB2P07550 413 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 ERCC5P28715 1186 aaPredicted RBP20.23■□□□□ 0.83
PNKP-224ENST00000631020 SSTR3P32745 418 aaPredicted RBP20.23■□□□□ 0.83
PNKP-224ENST00000631020 MLH1P40692 756 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 CLUL1Q15846 466 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 KYAT1Q16773 422 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 XKR4Q5GH76 650 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 FOXR2Q6PJQ5 311 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 TSG101Q99816 390 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 DACH1Q9UI36 760 aa20.23■□□□□ 0.83
PNKP-224ENST00000631020 BARX2Q9UMQ3 279 aaPredicted RBP20.23■□□□□ 0.83
PNKP-224ENST00000631020 BICDL2A1A5D9 508 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 HIDE1A8MVS5 230 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 LACTBL1A8MY62 500 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 AKAP3O75969 853 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 CCDC192P0DO97 292 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 RPL13P26373 211 aaKnown RBP20.22■□□□□ 0.83
PNKP-224ENST00000631020 SNRNP35Q16560 246 aaKnown RBP20.22■□□□□ 0.83
PNKP-224ENST00000631020 CT47A1Q5JQC4 288 aaPredicted RBP20.22■□□□□ 0.83
PNKP-224ENST00000631020 VN1R2Q8NFZ6 395 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 SNX27Q96L92 541 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 ZBP1Q9H171 429 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 EPHX3Q9H6B9 360 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 RPF1Q9H9Y2 349 aaKnown RBP20.22■□□□□ 0.83
PNKP-224ENST00000631020 KIAA1586Q9HCI6 787 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 TDRD15B5MCY1 1934 aaKnown RBP20.22■□□□□ 0.83
PNKP-224ENST00000631020 C2orf71A6NGG8 1288 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 ZNF233A6NK53 670 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 NT5C1B-RDH14C9J2C7 533 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 PTGESO14684 152 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 HOXB8P17481 243 aaPredicted RBP20.22■□□□□ 0.83
PNKP-224ENST00000631020 YARSP54577 528 aaKnown RBP20.22■□□□□ 0.83
PNKP-224ENST00000631020 FKBP3Q00688 224 aaKnown RBP20.22■□□□□ 0.83
PNKP-224ENST00000631020 ANO6Q4KMQ2 910 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 CEP135Q66GS9 1140 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 TMEM173Q86WV6 379 aaPredicted RBP20.22■□□□□ 0.83
PNKP-224ENST00000631020 KHSRPQ92945 711 aaKnown RBP eCLIP20.22■□□□□ 0.83
PNKP-224ENST00000631020 ZMAT2Q96NC0 199 aaKnown RBP20.22■□□□□ 0.83
PNKP-224ENST00000631020 DNAJB4Q9UDY4 337 aa20.22■□□□□ 0.83
PNKP-224ENST00000631020 TRIP11Q15643 1979 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 CTSAP10619 480 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 ALADP13716 330 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 SLC11A1P49279 550 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 SCNN1GP51170 649 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 POU5F1Q01860 360 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms