RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 C1orf232A0A0U1RR37 186 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 P4HA2O15460 535 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 TPST1O60507 370 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 CD19P15391 556 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 MYL7Q01449 175 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 AP1B1Q10567 949 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
SYNRG-229ENST00000621136 CARTPTQ16568 116 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 ASTE1Q2TB18 679 aaPredicted RBP13.18□□□□□ -0.3
SYNRG-229ENST00000621136 TCHHL1Q5QJ38 904 aaPredicted RBP13.18□□□□□ -0.3
SYNRG-229ENST00000621136 RSBN1LQ6PCB5 846 aaPredicted RBP13.18□□□□□ -0.3
SYNRG-229ENST00000621136 LPCAT2Q7L5N7 544 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 SCUBE1Q8IWY4 988 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 SH3GL1Q99961 368 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 RIOK1Q9BRS2 568 aaKnown RBP13.18□□□□□ -0.3
SYNRG-229ENST00000621136 SSU72P8A0A1W2PR75 194 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 TRIM49P0CI25 452 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 TRIM49CP0CI26 452 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 ENO3P13929 434 aaPredicted RBP13.18□□□□□ -0.3
SYNRG-229ENST00000621136 ZNF200P98182 395 aaPredicted RBP13.18□□□□□ -0.3
SYNRG-229ENST00000621136 ZFYVE19Q96K21 471 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 KLHL4Q9C0H6 718 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 RANBP17Q9H2T7 1088 aaKnown RBP13.18□□□□□ -0.3
SYNRG-229ENST00000621136 PCP4L1A6NKN8 68 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 TJP3O95049 919 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 LCA5LO95447 670 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 PSMG1O95456 288 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 BAG3O95817 575 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 MYL2P10916 166 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 RINT1Q6NUQ1 792 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 SCYL1Q96KG9 808 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 SENP7Q9BQF6 1050 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 RNPEPQ9H4A4 650 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 TTLL3Q9Y4R7 772 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 NEMP1O14524 444 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 AKR1B1P15121 316 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 CHRNDQ07001 517 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 ZNF554Q86TJ5 538 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 MAPKAPK5Q8IW41 473 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 CCDC24Q8N4L8 307 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 MCUQ8NE86 351 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 EURLQ9NYK6 297 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 GGA2Q9UJY4 613 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
SYNRG-229ENST00000621136 FLT1P17948 1338 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 H0YGN5 161 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 O00370 1275 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 STMN1P16949 149 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 ECHS1P30084 290 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 MAPK7Q13164 816 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 CNGA2Q16280 664 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 BTNL9Q6UXG8 535 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 FLCNQ8NFG4 579 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 NFS1Q9Y697 457 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 ADCY6O43306 1168 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 LRRC6Q86X45 466 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 ZNF280CQ8ND82 737 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 CAPSLQ8WWF8 208 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 SNF8Q96H20 258 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 FAM192AQ9GZU8 254 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 ING2Q9H160 280 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 EBF2Q9HAK2 575 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 GID8Q9NWU2 228 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 ADAMTS7Q9UKP4 1686 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 LMTK3Q96Q04 1460 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 USP17L3A6NCW0 530 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 USP17L4A6NCW7 530 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 SCYL2Q6P3W7 929 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 RNF19BQ6ZMZ0 732 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 USP17L1Q7RTZ2 530 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 FAM178BQ8IXR5 827 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 RFFLQ8WZ73 363 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 GFM2Q969S9 779 aaKnown RBP13.17□□□□□ -0.3
SYNRG-229ENST00000621136 C7orf25Q9BPX7 421 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 IMPG2Q9BZV3 1241 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 SNX25Q9H3E2 840 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 DENND2DQ9H6A0 471 aaPredicted RBP13.17□□□□□ -0.3
SYNRG-229ENST00000621136 NIP7Q9Y221 180 aaKnown RBP eCLIP13.17□□□□□ -0.3
SYNRG-229ENST00000621136 ALG6Q9Y672 507 aa13.17□□□□□ -0.3
SYNRG-229ENST00000621136 BAZ2AQ9UIF9 1905 aaKnown RBP13.17□□□□□ -0.3
SYNRG-229ENST00000621136 H7C0C1 242 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 GPC4O75487 556 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 DAB1O75553 588 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 CREB1P16220 341 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 NSFP46459 744 aaKnown RBP13.16□□□□□ -0.3
SYNRG-229ENST00000621136 ATP5OP48047 213 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 KHDC1Q4VXA5 237 aaKnown RBP13.16□□□□□ -0.3
SYNRG-229ENST00000621136 WDR44Q5JSH3 913 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 DYNLL2Q96FJ2 89 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 NOL6Q9H6R4 1146 aaKnown RBP13.16□□□□□ -0.3
SYNRG-229ENST00000621136 KRT82Q9NSB4 513 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
SYNRG-229ENST00000621136 AURKCQ9UQB9 309 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
SYNRG-229ENST00000621136 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 NDUFB5O43674 189 aa13.16□□□□□ -0.3
SYNRG-229ENST00000621136 MGEA5O60502 916 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms