RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 EPB41P11171 864 aaKnown RBP20.54■□□□□ 0.88
CLPTM1-209ENST00000588855 NT5DC4Q86YG4 428 aa20.54■□□□□ 0.88
CLPTM1-209ENST00000588855 BEST2Q8NFU1 509 aa20.54■□□□□ 0.88
CLPTM1-209ENST00000588855 PARD3BQ8TEW8 1205 aa20.54■□□□□ 0.88
CLPTM1-209ENST00000588855 CEP63Q96MT8 703 aa20.54■□□□□ 0.88
CLPTM1-209ENST00000588855 FAM161BQ96MY7 647 aa20.54■□□□□ 0.88
CLPTM1-209ENST00000588855 FUCA2Q9BTY2 467 aa20.54■□□□□ 0.88
CLPTM1-209ENST00000588855 LRRIQ3A6PVS8 624 aaPredicted RBP20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 PODXLO00592 558 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 FGF18O76093 207 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 KIF4AO95239 1232 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 RB1P06400 928 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 TNNI1P19237 187 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 CYP3A5P20815 502 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 IGFBP6P24592 240 aaPredicted RBP20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 LRPAP1P30533 357 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 PPM1AP35813 382 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 DLG4P78352 724 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 UPP1Q16831 310 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 WDR49Q8IV35 697 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 C3orf58Q8NDZ4 430 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 OR5B17Q8NGF7 314 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 HASPINQ8TF76 798 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 GDPD5Q8WTR4 605 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 IGSF21Q96ID5 467 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 UROC1Q96N76 676 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 C11orf84Q9BUA3 381 aaPredicted RBP20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 SRRTQ9BXP5 876 aaKnown RBP20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 MTMR12Q9C0I1 747 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 INTS13Q9NVM9 706 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 SPG21Q9NZD8 308 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 SCN1AP35498 2009 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 RFXAPO00287 272 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 PPEF2O14830 753 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 ITGB1P05556 798 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 TMEM191BP0C7N4 346 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 CCDC192P0DO97 292 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 BFSP1Q12934 665 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 GRIN2CQ14957 1233 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 CT47A1Q5JQC4 288 aaPredicted RBP20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 GPR153Q6NV75 609 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 INTS8Q75QN2 995 aaKnown RBP20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 Q7L0L9 218 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 FILIP1Q7Z7B0 1213 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 TMC2Q8TDI7 906 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 BORCS6Q96GS4 357 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 ALG13Q9NP73 1137 aaKnown RBP20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 DPP3Q9NY33 737 aa20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.53■□□□□ 0.88
CLPTM1-209ENST00000588855 CARNS1A5YM72 827 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 H3BNC9 293 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 TRIM49P0CI25 452 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 TRIM49CP0CI26 452 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 KRT13P13646 458 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 VAMP7P51809 220 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 GPM6BQ13491 265 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 ANO6Q4KMQ2 910 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 C1orf220Q5T0J3 134 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 C1orf127Q8N9H9 656 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 CACTINQ8WUQ7 758 aaKnown RBP20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 ZNF516Q92618 1163 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 TMEM169Q96HH4 297 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 ANKRD36BP1Q96IX9 119 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 COLEC11Q9BWP8 271 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 PRDM12Q9H4Q4 367 aa20.52■□□□□ 0.87
CLPTM1-209ENST00000588855 GRM6O15303 877 aa20.51■□□□□ 0.87
CLPTM1-209ENST00000588855 RPL9P32969 192 aaKnown RBP20.51■□□□□ 0.87
CLPTM1-209ENST00000588855 PLCB3Q01970 1234 aa20.51■□□□□ 0.87
CLPTM1-209ENST00000588855 DUOXA2Q1HG44 320 aa20.51■□□□□ 0.87
CLPTM1-209ENST00000588855 CCDC40Q4G0X9 1142 aa20.51■□□□□ 0.87
CLPTM1-209ENST00000588855 SCARA3Q6AZY7 606 aa20.51■□□□□ 0.87
CLPTM1-209ENST00000588855 CD300LGQ6UXG3 332 aa20.51■□□□□ 0.87
CLPTM1-209ENST00000588855 DDX27Q96GQ7 796 aaKnown RBP20.51■□□□□ 0.87
CLPTM1-209ENST00000588855 VN1R3Q9BXE9 311 aa20.51■□□□□ 0.87
CLPTM1-209ENST00000588855 ADAM28Q9UKQ2 775 aa20.51■□□□□ 0.87
CLPTM1-209ENST00000588855 TMEM189-UBE2V1I3L0A0 370 aa20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 B3GAT3O94766 335 aa20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 TNNC2P02585 160 aa20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 ITGB3P05106 788 aa20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 DNAJB1P25685 340 aa20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 CLDN10P78369 228 aa20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 TPD52L1Q16890 204 aaPredicted RBP20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 C9orf57Q5W0N0 161 aa20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 DCLRE1AQ6PJP8 1040 aa20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 SPPL3Q8TCT6 385 aa20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 ARMCX3Q9UH62 379 aaPredicted RBP20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 VWA8A3KMH1 1905 aa20.5■□□□□ 0.87
CLPTM1-209ENST00000588855 ANO9A1A5B4 782 aa20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 LPXNO60711 386 aa20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 CSPG5O95196 566 aa20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 FGFR1OPO95684 399 aaKnown RBP20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 ENPEPQ07075 957 aa20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 DCAF17Q5H9S7 520 aaPredicted RBP20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 FRMD5Q7Z6J6 570 aa20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 USP37Q86T82 979 aa20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 CXorf38Q8TB03 319 aa20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 ENOX1Q8TC92 643 aaKnown RBP20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 POF1BQ8WVV4 589 aa20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 SIX4Q9UIU6 781 aa20.49■□□□□ 0.87
CLPTM1-209ENST00000588855 REV3LO60673 3130 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms