RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 IFNL1Q8IU54 200 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 USP38Q8NB14 1042 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 ACTRT1Q8TDG2 376 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 RPF1Q9H9Y2 349 aaKnown RBP29.67■■■□□ 2.34
LIMD2-203ENST00000578067 FLRT1Q9NZU1 646 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 GTF3C4Q9UKN8 822 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 GNEQ9Y223 722 aaKnown RBP29.67■■■□□ 2.34
LIMD2-203ENST00000578067 A6NJR5 290 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 GPR25O00155 361 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 CEP104O60308 925 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 CSDE1O75534 798 aaKnown RBP29.67■■■□□ 2.34
LIMD2-203ENST00000578067 IL18RAPO95256 599 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 CYP1A2P05177 515 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 MCF2P10911 925 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 TFAMQ00059 246 aaKnown RBP29.67■■■□□ 2.34
LIMD2-203ENST00000578067 SCARA3Q6AZY7 606 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 C11orf63Q6NUN7 778 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 NLRP7Q8WX94 980 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 USP6NLQ92738 828 aa29.67■■■□□ 2.34
LIMD2-203ENST00000578067 RRN3P2A6NIE6 340 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 TMEM191BP0C7N4 346 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 INHBEP58166 350 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 SGSM1Q2NKQ1 1148 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 TMEM270Q6UE05 265 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 FUT8Q9BYC5 575 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 TNNC2P02585 160 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 MYL6P60660 151 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 TRPC3Q13507 836 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 KIAA0319LQ8IZA0 1049 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 RUBCNQ92622 972 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 ZNF653Q96CK0 615 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 PDZD7Q9H5P4 517 aa29.66■■■□□ 2.34
LIMD2-203ENST00000578067 SLC10A3P09131 477 aa29.65■■■□□ 2.34
LIMD2-203ENST00000578067 ZNF865P0CJ78 1059 aaPredicted RBP29.65■■■□□ 2.34
LIMD2-203ENST00000578067 UNGP13051 313 aaPredicted RBP29.65■■■□□ 2.34
LIMD2-203ENST00000578067 RNASE9P60153 205 aaKnown RBP29.65■■■□□ 2.34
LIMD2-203ENST00000578067 GLE1Q53GS7 698 aaKnown RBP29.65■■■□□ 2.34
LIMD2-203ENST00000578067 EFCAB13Q8IY85 973 aa29.65■■■□□ 2.34
LIMD2-203ENST00000578067 ANKRD36BP1Q96IX9 119 aa29.65■■■□□ 2.34
LIMD2-203ENST00000578067 TMEM192Q8IY95 271 aa29.64■■■□□ 2.34
LIMD2-203ENST00000578067 RASGEF1CQ8N431 466 aa29.64■■■□□ 2.34
LIMD2-203ENST00000578067 RBBP8NLQ8NC74 664 aaPredicted RBP29.64■■■□□ 2.34
LIMD2-203ENST00000578067 SCLT1Q96NL6 688 aa29.64■■■□□ 2.34
LIMD2-203ENST00000578067 SETD4Q9NVD3 440 aa29.64■■■□□ 2.34
LIMD2-203ENST00000578067 L1RE1Q9UN81 338 aa29.64■■■□□ 2.34
LIMD2-203ENST00000578067 ALG6Q9Y672 507 aa29.64■■■□□ 2.34
LIMD2-203ENST00000578067 DDX3YO15523 660 aaKnown RBP29.64■■■□□ 2.33
LIMD2-203ENST00000578067 ATMINO43313 823 aaPredicted RBP29.64■■■□□ 2.33
LIMD2-203ENST00000578067 SASH3O75995 380 aa29.64■■■□□ 2.33
LIMD2-203ENST00000578067 CXCL8P10145 99 aa29.64■■■□□ 2.33
LIMD2-203ENST00000578067 C8orf74Q6P047 294 aa29.64■■■□□ 2.33
LIMD2-203ENST00000578067 ZNF410Q86VK4 478 aa29.64■■■□□ 2.33
LIMD2-203ENST00000578067 UBR7Q8N806 425 aa29.64■■■□□ 2.33
LIMD2-203ENST00000578067 CPB2Q96IY4 423 aa29.64■■■□□ 2.33
LIMD2-203ENST00000578067 TMEM59LQ9UK28 342 aa29.64■■■□□ 2.33
LIMD2-203ENST00000578067 STAG3L1P0CL83 205 aa29.63■■■□□ 2.33
LIMD2-203ENST00000578067 ARF4P18085 180 aaPredicted RBP29.63■■■□□ 2.33
LIMD2-203ENST00000578067 CYP2C19P33261 490 aa29.63■■■□□ 2.33
LIMD2-203ENST00000578067 CBX1P83916 185 aa29.63■■■□□ 2.33
LIMD2-203ENST00000578067 POU5F1Q01860 360 aaKnown RBP29.63■■■□□ 2.33
LIMD2-203ENST00000578067 OLFML2BQ68BL8 750 aa29.63■■■□□ 2.33
LIMD2-203ENST00000578067 TLK2Q86UE8 772 aa29.63■■■□□ 2.33
LIMD2-203ENST00000578067 KRT222Q8N1A0 295 aa29.63■■■□□ 2.33
LIMD2-203ENST00000578067 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.63■■■□□ 2.33
LIMD2-203ENST00000578067 NUP85Q9BW27 656 aa29.63■■■□□ 2.33
LIMD2-203ENST00000578067 UVRAGQ9P2Y5 699 aa29.63■■■□□ 2.33
LIMD2-203ENST00000578067 PGRMC1O00264 195 aaKnown RBP29.62■■■□□ 2.33
LIMD2-203ENST00000578067 F2P00734 622 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 CCL14Q16627 93 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 HDAC7Q8WUI4 952 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 NIF3L1Q9GZT8 377 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 ZFYVE28Q9HCC9 887 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 CHORDC1Q9UHD1 332 aaPredicted RBP29.62■■■□□ 2.33
LIMD2-203ENST00000578067 ZMYND10O75800 440 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 CYP1A1P04798 512 aaPredicted RBP29.62■■■□□ 2.33
LIMD2-203ENST00000578067 CYP2B6P20813 491 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 GNA15P30679 374 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 RGS2P41220 211 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 MAP9Q49MG5 647 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 TRIM72Q6ZMU5 477 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 ZNF564Q8TBZ8 553 aaPredicted RBP29.62■■■□□ 2.33
LIMD2-203ENST00000578067 UBE2Q2Q8WVN8 375 aa29.62■■■□□ 2.33
LIMD2-203ENST00000578067 DMGDHQ9UI17 866 aaKnown RBP29.62■■■□□ 2.33
LIMD2-203ENST00000578067 KYAT1Q16773 422 aa29.61■■■□□ 2.33
LIMD2-203ENST00000578067 CCNI2Q6ZMN8 369 aaPredicted RBP29.61■■■□□ 2.33
LIMD2-203ENST00000578067 HDXQ7Z353 690 aa29.61■■■□□ 2.33
LIMD2-203ENST00000578067 RPS6KC1Q96S38 1066 aa29.61■■■□□ 2.33
LIMD2-203ENST00000578067 CNOT8Q9UFF9 292 aaKnown RBP29.61■■■□□ 2.33
LIMD2-203ENST00000578067 NRCAMQ92823 1304 aa29.61■■■□□ 2.33
LIMD2-203ENST00000578067 TSPAN1O60635 241 aa29.61■■■□□ 2.33
LIMD2-203ENST00000578067 ERLIN2O94905 339 aa29.61■■■□□ 2.33
LIMD2-203ENST00000578067 TNNC1P63316 161 aa29.61■■■□□ 2.33
LIMD2-203ENST00000578067 MCOLN2Q8IZK6 566 aa29.61■■■□□ 2.33
LIMD2-203ENST00000578067 NOC2LQ9Y3T9 749 aaKnown RBP29.61■■■□□ 2.33
LIMD2-203ENST00000578067 LACTBL1A8MY62 500 aa29.6■■■□□ 2.33
LIMD2-203ENST00000578067 MIF4GDA9UHW6 222 aaKnown RBP29.6■■■□□ 2.33
LIMD2-203ENST00000578067 SMIM10L2AP0DMW4 78 aa29.6■■■□□ 2.33
LIMD2-203ENST00000578067 SMIM10L2BP0DMW5 78 aa29.6■■■□□ 2.33
LIMD2-203ENST00000578067 ZNF132P52740 706 aa29.6■■■□□ 2.33
LIMD2-203ENST00000578067 MESDQ14696 234 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms