RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 SLC16A6O15403 523 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 DTNBO60941 627 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 FAM20BO75063 409 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 SLC43A1O75387 559 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 CD1AP06126 327 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 INSRRP14616 1297 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 MGAT1P26572 445 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 RNASE9P60153 205 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 NKX6-1P78426 367 aaPredicted RBP5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 FOXE3Q13461 319 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 PABPC1LQ4VXU2 614 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 PDCD4Q53EL6 469 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 MIIPQ5JXC2 388 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 LRRC55Q6ZSA7 311 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 C14orf80Q86SX3 495 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 FAM90A1Q86YD7 464 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 C3orf20Q8ND61 904 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 CLIP3Q96DZ5 547 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 C1GALT1C1Q96EU7 318 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 CGRRF1Q99675 332 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 GPR20Q99678 358 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 NMRK2Q9NPI5 230 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 GABBR1Q9UBS5 961 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 SLC45A2Q9UMX9 530 aa5.04□□□□□ -1.6
HERPUD1-212ENST00000567944 MARCH11A6NNE9 402 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 A6NNZ2 444 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 H3BML4 177 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 FTLP02792 175 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 RPLP2P05387 115 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 ITGB1P05556 798 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 ELANEP08246 267 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 MYBP10242 640 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 HSPA6P17066 643 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 TNFRSF1AP19438 455 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 GCSHP23434 173 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 PRDX5P30044 214 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 SLFN5Q08AF3 891 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 MLC1Q15049 377 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 SLC4A10Q6U841 1118 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 GADL1Q6ZQY3 521 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 OVCH2Q7RTZ1 564 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 HEATR3Q7Z4Q2 680 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 COL23A1Q86Y22 540 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 RHOT2Q8IXI1 618 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 MYO1HQ8N1T3 1032 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 ZBTB34Q8NCN2 500 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 TTC8Q8TAM2 541 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 CPT1CQ8TCG5 803 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 ZNF747Q9BV97 191 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 KLHL11Q9NVR0 708 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 GPRC5BQ9NZH0 403 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 DKK2Q9UBU2 259 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 POLHQ9Y253 713 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 MYRFQ9Y2G1 1151 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 NR2E3Q9Y5X4 410 aa5.03□□□□□ -1.6
HERPUD1-212ENST00000567944 CDHR4A6H8M9 788 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 UBXN7O94888 489 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 SCAF4O95104 1147 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 MTHFD1P11586 935 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 TYRP14679 529 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 NOMO3P69849 1222 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 GALEQ14376 348 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 NOMO2Q5JPE7 1267 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 CYB5RLQ6IPT4 315 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 RHOUQ7L0Q8 258 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 GDF7Q7Z4P5 450 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 PPP1R3BQ86XI6 285 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 OR56A1Q8NGH5 318 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 PHACTR3Q96KR7 559 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 PLEKHG4BQ96PX9 1271 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 DCLRE1CQ96SD1 692 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 C1orf43Q9BWL3 253 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 PARPBPQ9NWS1 579 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 JKAMPQ9P055 326 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 CHPF2Q9P2E5 772 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 ABCF2Q9UG63 623 aa5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 DDX20Q9UHI6 824 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 EIF2B4Q9UI10 523 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 USP15Q9Y4E8 981 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-212ENST00000567944 B3GALT2O43825 422 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 TUSC2O75896 110 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 HAUS5O94927 633 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 HTR1BP28222 390 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 CREMQ03060 361 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 KRTAP1-1Q07627 177 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 PLS1Q14651 629 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 ZXDCQ2QGD7 858 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 MINDY4Q4G0A6 757 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 THEMIS2Q5TEJ8 643 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 TSHZ3Q63HK5 1081 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 DENND1CQ8IV53 801 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 Q8N1X5 172 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 FITM2Q8N6M3 262 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 CELF5Q8N6W0 485 aaKnown RBP5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 NLGN4YQ8NFZ3 816 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 KLHDC4Q8TBB5 520 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 KLHL32Q96NJ5 620 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 SLC46A2Q9BY10 475 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 MRPL46Q9H2W6 279 aaKnown RBP5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 LMBRD1Q9NUN5 540 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms