RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 FUT10Q6P4F1 479 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 CEP57Q86XR8 500 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 HASPINQ8TF76 798 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 BCL7CQ8WUZ0 217 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-208ENST00000564703 DHTKD1Q96HY7 919 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-208ENST00000564703 FBXL18Q96ME1 805 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 TLE6Q9H808 572 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 PDE11AQ9HCR9 933 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 DMAC2Q9NW81 257 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 MARCH5Q9NX47 278 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 DPP3Q9NY33 737 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 TMEM189-UBE2V1I3L0A0 370 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 CETN3O15182 167 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 KIF4AO95239 1232 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 URODP06132 367 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 NFICP08651 508 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 TMEM191BP0C7N4 346 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 CTSAP10619 480 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 TNNI1P19237 187 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 PAX3P23760 479 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 NR2F2P24468 414 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 LRPAP1P30533 357 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 IRS1P35568 1242 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 MORC3Q14149 939 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 DUOXA2Q1HG44 320 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 EDRF1Q3B7T1 1238 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 TCEAL5Q5H9L2 206 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 FAM171A1Q5VUB5 890 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 USP37Q86T82 979 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 ADSSL1Q8N142 457 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 MRPL43Q8N983 215 aaKnown RBP17.3■□□□□ 0.36
RAB40C-208ENST00000564703 TMEM174Q8WUU8 243 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 CCDC127Q96BQ5 260 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 ANKRD36BP1Q96IX9 119 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 GPR62Q9BZJ7 368 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 IGFLR1Q9H665 355 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 TUBGCP4Q9UGJ1 667 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 MYO7AQ13402 2215 aa17.3■□□□□ 0.36
RAB40C-208ENST00000564703 PLXNA4Q9HCM2 1894 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 F8W810 466 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 FSCN2O14926 492 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 TNNC2P02585 160 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 DLATP10515 647 aaKnown RBP17.29■□□□□ 0.36
RAB40C-208ENST00000564703 PTMSP20962 102 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 GLUD2P49448 558 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 CYP24A1Q07973 514 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 NFIL3Q16649 462 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 CENPPQ6IPU0 288 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 KLHL10Q6JEL2 608 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 EP400NLQ6ZTU2 488 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 RBM23Q86U06 439 aaKnown RBP17.29■□□□□ 0.36
RAB40C-208ENST00000564703 GPT2Q8TD30 523 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 HERC2P3Q9BVR0 1158 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 EMILIN2Q9BXX0 1053 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 CHD9Q3L8U1 2897 aa17.29■□□□□ 0.36
RAB40C-208ENST00000564703 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-208ENST00000564703 BICDL2A1A5D9 508 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 FSD2A1L4K1 749 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 C2CD2LO14523 706 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 KRT13P13646 458 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 CCNE1P24864 410 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 PSMC2P35998 433 aaKnown RBP17.28■□□□□ 0.36
RAB40C-208ENST00000564703 FKBP3Q00688 224 aaKnown RBP17.28■□□□□ 0.36
RAB40C-208ENST00000564703 LRRC63Q05C16 580 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 PSMD6Q15008 389 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 ANKRD40Q6AI12 368 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 PDXDC1Q6P996 788 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 TAS1R1Q7RTX1 841 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 CSGALNACT2Q8N6G5 542 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 MFSD14AQ96MC6 490 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 CDCA3Q99618 268 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-208ENST00000564703 TTPALQ9BTX7 342 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 ZBP1Q9H171 429 aa17.28■□□□□ 0.36
RAB40C-208ENST00000564703 ARHGEF37A1IGU5 675 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 C2orf71A6NGG8 1288 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 KRT19P08727 400 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 NRIP1P48552 1158 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 GUCY2FP51841 1108 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 RBP5P82980 135 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 C9orf57Q5W0N0 161 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 WDR49Q8IV35 697 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 EFCAB13Q8IY85 973 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 GPR65Q8IYL9 337 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 MLKLQ8NB16 471 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 AUTS2Q8WXX7 1259 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 RIN2Q8WYP3 895 aaPredicted RBP17.27■□□□□ 0.36
RAB40C-208ENST00000564703 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.27■□□□□ 0.36
RAB40C-208ENST00000564703 INTS13Q9NVM9 706 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 IRAK3Q9Y616 596 aa17.27■□□□□ 0.36
RAB40C-208ENST00000564703 COL4A4P53420 1690 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-208ENST00000564703 HIDE1A8MVS5 230 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 PPP1R3GB7ZBB8 358 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 PIRO00625 290 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 PER2O15055 1255 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 MAPK13O15264 365 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 PHACTR2O75167 634 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 EPB41P11171 864 aaKnown RBP17.26■□□□□ 0.35
RAB40C-208ENST00000564703 KLRC2P26717 231 aa17.26■□□□□ 0.35
RAB40C-208ENST00000564703 PNPLA4P41247 253 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms