RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 FNBP1Q96RU3 617 aa18.9■□□□□ 0.62
TPM1-214ENST00000558544 ALG13Q9NP73 1137 aaKnown RBP18.9■□□□□ 0.62
TPM1-214ENST00000558544 RWDD2AQ9UIY3 292 aa18.9■□□□□ 0.62
TPM1-214ENST00000558544 CARNS1A5YM72 827 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 H3BNC9 293 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 PODXLO00592 558 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 MAPK13O15264 365 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 CSPG5O95196 566 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 KIF4AO95239 1232 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 CYP3A5P20815 502 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 PSMC2P35998 433 aaKnown RBP18.89■□□□□ 0.61
TPM1-214ENST00000558544 UPP1Q16831 310 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 SPATA1Q5VX52 437 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 NT5DC4Q86YG4 428 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 MED15Q96RN5 788 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 POP1Q99575 1024 aaKnown RBP18.89■□□□□ 0.61
TPM1-214ENST00000558544 CGRRF1Q99675 332 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 COLEC11Q9BWP8 271 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 GZF1Q9H116 711 aaPredicted RBP18.89■□□□□ 0.61
TPM1-214ENST00000558544 ANO10Q9NW15 660 aa18.89■□□□□ 0.61
TPM1-214ENST00000558544 SYCE3A1L190 88 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 GRM6O15303 877 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 TMEM191BP0C7N4 346 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 EPB41P11171 864 aaKnown RBP18.88■□□□□ 0.61
TPM1-214ENST00000558544 TNNI1P19237 187 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 TYRO3Q06418 890 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 FOXR2Q6PJQ5 311 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 C11orf57Q6ZUT1 292 aaPredicted RBP18.88■□□□□ 0.61
TPM1-214ENST00000558544 WDR49Q8IV35 697 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 DEFB123Q8N688 67 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 CSGALNACT2Q8N6G5 542 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 C3orf58Q8NDZ4 430 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 OR5B17Q8NGF7 314 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 MKNK1Q9BUB5 465 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 MTMR12Q9C0I1 747 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 INTS13Q9NVM9 706 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 DPP3Q9NY33 737 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 TSC2P49815 1807 aa18.88■□□□□ 0.61
TPM1-214ENST00000558544 LRRIQ3A6PVS8 624 aaPredicted RBP18.87■□□□□ 0.61
TPM1-214ENST00000558544 SLC16A3O15427 465 aaKnown RBP18.87■□□□□ 0.61
TPM1-214ENST00000558544 LPXNO60711 386 aa18.87■□□□□ 0.61
TPM1-214ENST00000558544 LETM1O95202 739 aaPredicted RBP18.87■□□□□ 0.61
TPM1-214ENST00000558544 IGFBP6P24592 240 aaPredicted RBP18.87■□□□□ 0.61
TPM1-214ENST00000558544 LRPAP1P30533 357 aa18.87■□□□□ 0.61
TPM1-214ENST00000558544 DLG4P78352 724 aa18.87■□□□□ 0.61
TPM1-214ENST00000558544 PLCB3Q01970 1234 aa18.87■□□□□ 0.61
TPM1-214ENST00000558544 INTS8Q75QN2 995 aaKnown RBP18.87■□□□□ 0.61
TPM1-214ENST00000558544 SPPL3Q8TCT6 385 aa18.87■□□□□ 0.61
TPM1-214ENST00000558544 PARD3BQ8TEW8 1205 aa18.87■□□□□ 0.61
TPM1-214ENST00000558544 CACTINQ8WUQ7 758 aaKnown RBP18.87■□□□□ 0.61
TPM1-214ENST00000558544 POF1BQ8WVV4 589 aa18.87■□□□□ 0.61
TPM1-214ENST00000558544 DDX27Q96GQ7 796 aaKnown RBP18.87■□□□□ 0.61
TPM1-214ENST00000558544 ANKRD36BP1Q96IX9 119 aa18.87■□□□□ 0.61
TPM1-214ENST00000558544 ADAM28Q9UKQ2 775 aa18.87■□□□□ 0.61
TPM1-214ENST00000558544 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.87■□□□□ 0.61
TPM1-214ENST00000558544 PPEF2O14830 753 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 B3GAT3O94766 335 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 KRT13P13646 458 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 DNAJB1P25685 340 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 ERCC5P28715 1186 aaPredicted RBP18.86■□□□□ 0.61
TPM1-214ENST00000558544 RPL9P32969 192 aaKnown RBP18.86■□□□□ 0.61
TPM1-214ENST00000558544 KRT17Q04695 432 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 BFSP1Q12934 665 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 DCLRE1AQ6PJP8 1040 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 C1orf127Q8N9H9 656 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 CEP63Q96MT8 703 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 VN1R3Q9BXE9 311 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 SRRTQ9BXP5 876 aaKnown RBP18.86■□□□□ 0.61
TPM1-214ENST00000558544 DNAJC25Q9H1X3 360 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 REV3LO60673 3130 aa18.86■□□□□ 0.61
TPM1-214ENST00000558544 MYO7AQ13402 2215 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 TMEM189-UBE2V1I3L0A0 370 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 TADA2AO75478 443 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 TNNC2P02585 160 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 ITGB3P05106 788 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 TRIM49P0CI25 452 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 TRIM49CP0CI26 452 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 VAMP7P51809 220 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 TPD52L1Q16890 204 aaPredicted RBP18.85■□□□□ 0.61
TPM1-214ENST00000558544 DUOXA2Q1HG44 320 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 ZSCAN23Q3MJ62 389 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 C9orf57Q5W0N0 161 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 FUT10Q6P4F1 479 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 FILIP1Q7Z7B0 1213 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 TMC2Q8TDI7 906 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 ZNF516Q92618 1163 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 BORCS6Q96GS4 357 aa18.85■□□□□ 0.61
TPM1-214ENST00000558544 POLR2BP30876 1174 aaKnown RBP18.84■□□□□ 0.61
TPM1-214ENST00000558544 BRCC3P46736 316 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 UBE3AQ05086 875 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 CCDC40Q4G0X9 1142 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 CT47A1Q5JQC4 288 aaPredicted RBP18.84■□□□□ 0.61
TPM1-214ENST00000558544 C1orf220Q5T0J3 134 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 SCARA3Q6AZY7 606 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 CD300LGQ6UXG3 332 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 USP37Q86T82 979 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 DDX53Q86TM3 631 aaKnown RBP18.84■□□□□ 0.61
TPM1-214ENST00000558544 MYLIPQ8WY64 445 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 GUCD1Q96NT3 240 aa18.84■□□□□ 0.61
TPM1-214ENST00000558544 GPR62Q9BZJ7 368 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms