RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 KAT5Q92993 513 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 TRIM43Q96BQ3 446 aaPredicted RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 SLC46A2Q9BY10 475 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 CHST12Q9NRB3 414 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 RXFP3Q9NSD7 469 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 COMMD10Q9Y6G5 202 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 A0A1B0GTL3 188 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 C1QTNF3-AMACRE9PGA6 284 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 PPFIA4O75335 1185 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 SASH1O94885 1247 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 POMCP01189 267 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 FTLP02792 175 aaPredicted RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 XRCC6P12956 609 aaKnown RBP eCLIP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 VIPR2P41587 438 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 RABGGTBP53611 331 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 AK2P54819 239 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 PRR16Q569H4 304 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 FKBP15Q5T1M5 1219 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 C1QL3Q5VWW1 255 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 GAS2L3Q86XJ1 694 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 ZFPM1Q8IX07 1006 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 SPICE1Q8N0Z3 855 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 RNF152Q8N8N0 203 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 ZFP28Q8NHY6 868 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 MIEF2Q96C03 454 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 SIK2Q9H0K1 926 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 LMBRD1Q9NUN5 540 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 CFAP97Q9P2B7 532 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 AJAP1Q9UKB5 411 aaPredicted RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 PHTF1Q9UMS5 762 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 RBM8AQ9Y5S9 174 aaKnown RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 UBE2QL1A1L167 161 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 AREL1O15033 823 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 CCP110O43303 1012 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 MGEA5O60502 916 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 PRAMEF4O60810 478 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 IPO13O94829 963 aaKnown RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 MATN4O95460 622 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 CYP2C9P11712 490 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 NPR1P16066 1061 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 CDK7P50613 346 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 APBA1Q02410 837 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 TBC1D10BQ4KMP7 808 aaPredicted RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 FAM102AQ5T9C2 384 aaPredicted RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 AGAP9Q5VTM2 703 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 SPOCD1Q6ZMY3 1216 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 DAAM2Q86T65 1068 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 WDR75Q8IWA0 830 aaKnown RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 ANKRD53Q8N9V6 530 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 ATXN2LQ8WWM7 1075 aaKnown RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 SLC2A13Q96QE2 648 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 DCLRE1CQ96SD1 692 aaKnown RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 GOLGA2P5Q9HBQ8 144 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 PARD6AQ9NPB6 346 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 PIH1D1Q9NWS0 290 aaKnown RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 PLA2G3Q9NZ20 509 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 ZFR2Q9UPR6 939 aaKnown RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 CHST2Q9Y4C5 530 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 GAGE12BA1L429 117 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 GAGE12HA6NDE8 117 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 OR2W5A6NFC9 320 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 RASA4BC9J798 803 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 IFRD1O00458 451 aaPredicted RBP2.15□□□□□ -2.06
HIF1A-212ENST00000557538 APAF1O14727 1248 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 RASA4O43374 803 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 CKBP12277 381 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 ATP5JP18859 108 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 CASRP41180 1078 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 PIK3CGP48736 1102 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 JAG1P78504 1218 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 PICALMQ13492 652 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 R3HDM1Q15032 1099 aaKnown RBP2.15□□□□□ -2.06
HIF1A-212ENST00000557538 CNGA2Q16280 664 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 FLYWCH1Q4VC44 716 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 COBLL1Q53SF7 1204 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 CATSPERGQ6ZRH7 1159 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 LRRC55Q6ZSA7 311 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 TAX1BP1Q86VP1 789 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 AOPEPQ8N6M6 819 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 LENG9Q96B70 501 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 EID2BQ96D98 161 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 LMF1Q96S06 567 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 PLA2G12BQ9BX93 195 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 ZNF518BQ9C0D4 1074 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 SENP6Q9GZR1 1112 aaPredicted RBP2.15□□□□□ -2.06
HIF1A-212ENST00000557538 RSAD1Q9HA92 442 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 NLRC4Q9NPP4 1024 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 TRIM36Q9NQ86 728 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 MYO1AQ9UBC5 1043 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 FEZ2Q9UHY8 353 aaPredicted RBP2.15□□□□□ -2.06
HIF1A-212ENST00000557538 MAGEL2Q9UJ55 1249 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 PLEKHM1Q9Y4G2 1056 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 DUSP10Q9Y6W6 482 aa2.15□□□□□ -2.06
HIF1A-212ENST00000557538 A0A087WWL8 130 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 GPR42O15529 346 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 MFAP3LO75121 409 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 RARBP10826 455 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 ACRV1P26436 265 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 KLRC1P26715 233 aa2.15□□□□□ -2.07
HIF1A-212ENST00000557538 BMPR1AP36894 532 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms