RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 DCLK2Q8N568 766 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 CSGALNACT2Q8N6G5 542 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 SPC24Q8NBT2 197 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 URGCPQ8TCY9 931 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 DYDC2Q96IM9 177 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 CCDC43Q96MW1 224 aaKnown RBP12.09□□□□□ -0.47
CHGA-205ENST00000556098 KLHL5Q96PQ7 755 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 MED15Q96RN5 788 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 GCOM2Q9BZD3 368 aaPredicted RBP12.09□□□□□ -0.47
CHGA-205ENST00000556098 BHMT2Q9H2M3 363 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 TBC1D17Q9HA65 648 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 PIDD1Q9HB75 910 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 MAN1C1Q9NR34 630 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 NRBP2Q9NSY0 501 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 TBC1D13Q9NVG8 400 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 PCDHA10Q9Y5I2 948 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHGA-205ENST00000556098 MAFBQ9Y5Q3 323 aaPredicted RBP12.09□□□□□ -0.47
CHGA-205ENST00000556098 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHGA-205ENST00000556098 DCHS1Q96JQ0 3298 aa12.08□□□□□ -0.47
CHGA-205ENST00000556098 RIF1Q5UIP0 2472 aaKnown RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 A0A087WZ62 844 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 A0A1W2PQC6 194 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 KRBA1A5PL33 1030 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 ARHGEF35A5YM69 484 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 TMEM150BA6NC51 233 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 GALTP07902 379 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 SPATA31D3P0C874 917 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 PHKA2P46019 1235 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 DNM2P50570 870 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 POLGP54098 1239 aaPredicted RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 STX17P56962 302 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 SNRPFP62306 86 aaKnown RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 FKBP3Q00688 224 aaKnown RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 CYP4A11Q02928 519 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 PPP2R3AQ06190 1150 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 DRP2Q13474 957 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 NFIL3Q16649 462 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 UGCGQ16739 394 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 RINT1Q6NUQ1 792 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 SPATA31D4Q6ZUB0 917 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 GET4Q7L5D6 327 aaPredicted RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 OTUD6AQ7L8S5 288 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 ZNF598Q86UK7 904 aaKnown RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 LRRC8AQ8IWT6 810 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 TPH2Q8IWU9 490 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 GOLGA5Q8TBA6 731 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 GJA10Q969M2 543 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 CCDC51Q96ER9 411 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 NLRP4Q96MN2 994 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 FDXACB1Q9BRP7 624 aaPredicted RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 C17orf75Q9HAS0 396 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 PARVGQ9HBI0 331 aa12.08□□□□□ -0.48
CHGA-205ENST00000556098 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 MRPL17Q9NRX2 175 aaKnown RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 SAMSN1Q9NSI8 373 aaKnown RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 CGNQ9P2M7 1197 aaKnown RBP12.08□□□□□ -0.48
CHGA-205ENST00000556098 CCDC195A0A1B0GUA6 201 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 INPPL1O15357 1258 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 FAM13AO94988 1023 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 POMCP01189 267 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 CNPP09543 421 aaKnown RBP12.07□□□□□ -0.48
CHGA-205ENST00000556098 CLCN4P51793 760 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
CHGA-205ENST00000556098 MARSP56192 900 aaKnown RBP12.07□□□□□ -0.48
CHGA-205ENST00000556098 KRT31Q15323 416 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 ARSHQ5FYA8 562 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 ZC3H14Q6PJT7 736 aaKnown RBP12.07□□□□□ -0.48
CHGA-205ENST00000556098 FAM43BQ6ZT52 329 aaPredicted RBP12.07□□□□□ -0.48
CHGA-205ENST00000556098 C1orf186Q6ZWK4 172 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 CATSPER4Q7RTX7 472 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 APTXQ7Z2E3 356 aaKnown RBP12.07□□□□□ -0.48
CHGA-205ENST00000556098 ZNF280BQ86YH2 543 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 RHPN2Q8IUC4 686 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 CNGA4Q8IV77 575 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 ZC3H3Q8IXZ2 948 aaKnown RBP12.07□□□□□ -0.48
CHGA-205ENST00000556098 GPR152Q8TDT2 470 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 DRC1Q96MC2 740 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 REEP2Q9BRK0 252 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 VN1R3Q9BXE9 311 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 NAA15Q9BXJ9 866 aaKnown RBP12.07□□□□□ -0.48
CHGA-205ENST00000556098 SLC39A2Q9NP94 309 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 KCND1Q9NSA2 647 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 RGL1Q9NZL6 768 aa12.07□□□□□ -0.48
CHGA-205ENST00000556098 LARSQ9P2J5 1176 aaKnown RBP12.07□□□□□ -0.48
CHGA-205ENST00000556098 PRG3Q9Y2Y8 225 aaPredicted RBP12.07□□□□□ -0.48
CHGA-205ENST00000556098 DMXL1Q9Y485 3027 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 LGALS16A8MUM7 142 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 H0YCG3 227 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 PDXKO00764 312 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 N4BP3O15049 544 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 CALUO43852 315 aaPredicted RBP12.06□□□□□ -0.48
CHGA-205ENST00000556098 ZNF862O60290 1169 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 KRT37O76014 449 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 URODP06132 367 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 RPL13P26373 211 aaKnown RBP12.06□□□□□ -0.48
CHGA-205ENST00000556098 PBX1P40424 430 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 OR1G1P47890 313 aa12.06□□□□□ -0.48
CHGA-205ENST00000556098 CTTNQ14247 550 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms