RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 HCFC2Q9Y5Z7 792 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 FAM237AA0A1B0GTK4 181 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 DLL1O00548 723 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 FAM189A1O60320 539 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 ZNF202O95125 648 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 GLUD1P00367 558 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 CNPP09543 421 aaKnown RBP13.14□□□□□ -0.31
SRP54-206ENST00000555317 BMP1P13497 986 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 CYP3A5P20815 502 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 MCM4P33991 863 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 SOX4Q06945 474 aaPredicted RBP13.14□□□□□ -0.31
SRP54-206ENST00000555317 CES5AQ6NT32 575 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 ANKRD54Q6NXT1 300 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 KRBA2Q6ZNG9 492 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 GPR65Q8IYL9 337 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 RNF168Q8IYW5 571 aaPredicted RBP13.14□□□□□ -0.31
SRP54-206ENST00000555317 VN1R2Q8NFZ6 395 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.14□□□□□ -0.31
SRP54-206ENST00000555317 SAAL1Q96ER3 474 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 KLHL5Q96PQ7 755 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 GOLPH3LQ9H4A5 285 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 ASB7Q9H672 318 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 SLC39A2Q9NP94 309 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 CHST7Q9NS84 486 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 CHMP5Q9NZZ3 219 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 CLEC1BQ9P126 229 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 TUBGCP4Q9UGJ1 667 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 HOOK1Q9UJC3 728 aaKnown RBP13.14□□□□□ -0.31
SRP54-206ENST00000555317 DERAQ9Y315 318 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 C5orf42Q9H799 3197 aa13.14□□□□□ -0.31
SRP54-206ENST00000555317 ANK1P16157 1881 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 GRXCR2A6NFK2 248 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 TEX28O15482 410 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 EXTL3O43909 919 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 KIF20AO95235 890 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 RPN1P04843 607 aaKnown RBP13.13□□□□□ -0.31
SRP54-206ENST00000555317 ADSSP30520 456 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
SRP54-206ENST00000555317 POU5F1Q01860 360 aaKnown RBP13.13□□□□□ -0.31
SRP54-206ENST00000555317 PSMD2Q13200 908 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 PSMD5Q16401 504 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 KIAA0319Q5VV43 1072 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 JADE1Q6IE81 842 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 TMEM184AQ6ZMB5 413 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 NELFCDQ8IXH7 590 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 SMRP1Q8NCR6 262 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 GLIS3Q8NEA6 775 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 GOLGA5Q8TBA6 731 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 MSLNLQ96KJ4 702 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 POP1Q99575 1024 aaKnown RBP13.13□□□□□ -0.31
SRP54-206ENST00000555317 CBWD1Q9BRT8 395 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
SRP54-206ENST00000555317 IKZF4Q9H2S9 585 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 PCIF1Q9H4Z3 704 aa13.13□□□□□ -0.31
SRP54-206ENST00000555317 RBAKQ9NYW8 714 aaPredicted RBP13.13□□□□□ -0.31
SRP54-206ENST00000555317 VWA8A3KMH1 1905 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 GOLGA8IPA6NC78 632 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 GOLGA8JA6NMD2 632 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 MEFVO15553 781 aaPredicted RBP13.12□□□□□ -0.31
SRP54-206ENST00000555317 MBTPS2O43462 519 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 LILRB3O75022 631 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 EFEMP2O95967 443 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 NFICP08651 508 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 IL9P15248 144 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 EPCAMP16422 314 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 SSTR3P32745 418 aaPredicted RBP13.12□□□□□ -0.31
SRP54-206ENST00000555317 CLCN4P51793 760 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 SNRPFP62306 86 aaKnown RBP13.12□□□□□ -0.31
SRP54-206ENST00000555317 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 KMT5BQ4FZB7 885 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 RTP2Q5QGT7 225 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 PRSS55Q6UWB4 352 aaPredicted RBP13.12□□□□□ -0.31
SRP54-206ENST00000555317 ANKS3Q6ZW76 656 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 EPM2AIP1Q7L775 607 aaPredicted RBP13.12□□□□□ -0.31
SRP54-206ENST00000555317 BRSK2Q8IWQ3 736 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 APPL2Q8NEU8 664 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 ZNF507Q8TCN5 953 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 CACTINQ8WUQ7 758 aaKnown RBP13.12□□□□□ -0.31
SRP54-206ENST00000555317 SCFD1Q8WVM8 642 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 PIK3R5Q8WYR1 880 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 FBXL18Q96ME1 805 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 APOL5Q9BWW9 433 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 SFXN1Q9H9B4 322 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 RXFP1Q9HBX9 757 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 KIAA1586Q9HCI6 787 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 FNIP2Q9P278 1114 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 CGNQ9P2M7 1197 aaKnown RBP13.12□□□□□ -0.31
SRP54-206ENST00000555317 R3HCC1Q9Y3T6 440 aaKnown RBP13.12□□□□□ -0.31
SRP54-206ENST00000555317 C2CD2Q9Y426 696 aa13.12□□□□□ -0.31
SRP54-206ENST00000555317 USP15Q9Y4E8 981 aaPredicted RBP13.12□□□□□ -0.31
SRP54-206ENST00000555317 ARHGEF37A1IGU5 675 aa13.11□□□□□ -0.31
SRP54-206ENST00000555317 ZNF233A6NK53 670 aa13.11□□□□□ -0.31
SRP54-206ENST00000555317 I3L4J1 428 aa13.11□□□□□ -0.31
SRP54-206ENST00000555317 SYN3O14994 580 aa13.11□□□□□ -0.31
SRP54-206ENST00000555317 KLRC4O43908 158 aa13.11□□□□□ -0.31
SRP54-206ENST00000555317 ADRB2P07550 413 aa13.11□□□□□ -0.31
SRP54-206ENST00000555317 RPL17P18621 184 aaKnown RBP13.11□□□□□ -0.31
SRP54-206ENST00000555317 FGFR3P22607 806 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms