RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 PSRC1Q6PGN9 363 aaPredicted RBP18.75■□□□□ 0.59
SHOX-204ENST00000554971 EPM2AIP1Q7L775 607 aaPredicted RBP18.75■□□□□ 0.59
SHOX-204ENST00000554971 CDR2LQ86X02 465 aaPredicted RBP18.75■□□□□ 0.59
SHOX-204ENST00000554971 APBB2Q92870 758 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 CPB2Q96IY4 423 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 MMS19Q96T76 1030 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 IKZF4Q9H2S9 585 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 ST6GALNAC4Q9H4F1 302 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 TMEM134Q9H6X4 195 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 METTL14Q9HCE5 456 aaKnown RBP18.75■□□□□ 0.59
SHOX-204ENST00000554971 PLCB1Q9NQ66 1216 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 AIPL1Q9NZN9 384 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 CNTNAP2Q9UHC6 1331 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 ACKR2O00590 384 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 FGBP02675 491 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 MYBP10242 640 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 SHHQ15465 462 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 RASIP1Q5U651 963 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 HGSNATQ68CP4 663 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 MMGT1Q8N4V1 131 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 TSPYL2Q9H2G4 693 aaPredicted RBP18.74■□□□□ 0.59
SHOX-204ENST00000554971 PRMT7Q9NVM4 692 aaPredicted RBP18.74■□□□□ 0.59
SHOX-204ENST00000554971 PSD3Q9NYI0 1048 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 PIN4Q9Y237 131 aaKnown RBP18.74■□□□□ 0.59
SHOX-204ENST00000554971 BZW2Q9Y6E2 419 aaKnown RBP18.74■□□□□ 0.59
SHOX-204ENST00000554971 MYO9BQ13459 2157 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 MACROD2A1Z1Q3 448 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 CCDC66A2RUB6 948 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 HOXD13P35453 343 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 PCBP1Q15365 356 aaKnown RBP eCLIP18.74■□□□□ 0.59
SHOX-204ENST00000554971 CHRDL2Q6WN34 429 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.74■□□□□ 0.59
SHOX-204ENST00000554971 NOX5Q96PH1 765 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 ADAM2Q99965 735 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 UBE2OQ9C0C9 1292 aaKnown RBP18.74■□□□□ 0.59
SHOX-204ENST00000554971 TBX20Q9UMR3 447 aa18.74■□□□□ 0.59
SHOX-204ENST00000554971 ENPP3O14638 875 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 SLC16A3O15427 465 aaKnown RBP18.73■□□□□ 0.59
SHOX-204ENST00000554971 NOL4O94818 638 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 ERLIN2O94905 339 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 PLEKP08567 350 aaPredicted RBP18.73■□□□□ 0.59
SHOX-204ENST00000554971 BMP8BP34820 402 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 WDR5P61964 334 aaKnown RBP18.73■□□□□ 0.59
SHOX-204ENST00000554971 IKBKEQ14164 716 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 NFIL3Q16649 462 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 CRIPAKQ8N1N5 446 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 HERVK_113Q902F9 699 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 FTHL17Q9BXU8 183 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 MED4Q9NPJ6 270 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 FBXL5Q9UKA1 691 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 HYOU1Q9Y4L1 999 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 ATP8B3O60423 1300 aa18.73■□□□□ 0.59
SHOX-204ENST00000554971 A0A1B0GUA9 196 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 GCNT3O95395 438 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 DEFB103AP81534 67 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 TMCO2Q7Z6W1 182 aaPredicted RBP18.72■□□□□ 0.59
SHOX-204ENST00000554971 MAP4K3Q8IVH8 894 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 EXOC4Q96A65 974 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 ST7Q9NRC1 585 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 RGS18Q9NS28 235 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 KCNG1Q9UIX4 513 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 DUSP10Q9Y6W6 482 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 SPTBN5Q9NRC6 3674 aaKnown RBP18.72■□□□□ 0.59
SHOX-204ENST00000554971 COL4A6Q14031 1691 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 ABHD14A-ACY1A0A1B0GW23 586 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 ABLIM1O14639 778 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 BAIAP3O94812 1187 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 PRPF4BQ13523 1007 aaKnown RBP18.72■□□□□ 0.59
SHOX-204ENST00000554971 CASP8Q14790 479 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 UBXN11Q5T124 520 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 EEF1DP3Q658K8 133 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 ACO2Q99798 780 aaKnown RBP18.72■□□□□ 0.59
SHOX-204ENST00000554971 TARS2Q9BW92 718 aaKnown RBP18.72■□□□□ 0.59
SHOX-204ENST00000554971 LSM14BQ9BX40 385 aaKnown RBP18.72■□□□□ 0.59
SHOX-204ENST00000554971 CHST12Q9NRB3 414 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 TYW1Q9NV66 732 aaKnown RBP18.72■□□□□ 0.59
SHOX-204ENST00000554971 ARMCX3Q9UH62 379 aaPredicted RBP18.72■□□□□ 0.59
SHOX-204ENST00000554971 CITO14578 2027 aa18.72■□□□□ 0.59
SHOX-204ENST00000554971 FNDC1Q4ZHG4 1894 aaPredicted RBP18.71■□□□□ 0.59
SHOX-204ENST00000554971 ZMYM2Q9UBW7 1377 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 BTNL10A8MVZ5 291 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 TISP43B9A030 160 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 C9IYK1 514 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 EIF3DO15371 548 aaKnown RBP eCLIP18.71■□□□□ 0.59
SHOX-204ENST00000554971 PRPF6O94906 941 aaKnown RBP18.71■□□□□ 0.59
SHOX-204ENST00000554971 NR2F2P24468 414 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 SLC18A3Q16572 532 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 SLC39A4Q6P5W5 647 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 CREG2Q8IUH2 290 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 NELFCDQ8IXH7 590 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 EIF2AQ9BY44 585 aaKnown RBP18.71■□□□□ 0.59
SHOX-204ENST00000554971 HAPLN2Q9GZV7 340 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 PDZD7Q9H5P4 517 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 PTPRHQ9HD43 1115 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.71■□□□□ 0.59
SHOX-204ENST00000554971 TFR2Q9UP52 801 aa18.71■□□□□ 0.59
SHOX-204ENST00000554971 GTPBP10A4D1E9 387 aaKnown RBP18.7■□□□□ 0.58
SHOX-204ENST00000554971 ATF7P17544 494 aaPredicted RBP18.7■□□□□ 0.58
SHOX-204ENST00000554971 PROZP22891 400 aa18.7■□□□□ 0.58
SHOX-204ENST00000554971 KCNH2Q12809 1159 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms