RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 THADAQ6YHU6 1953 aa18.72■□□□□ 0.59
NEK9-204ENST00000554258 IGKV6-21A0A0C4DH24 114 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 FAM221BA6H8Z2 402 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 H0Y626 953 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 K7ELQ4 463 aaPredicted RBP18.71■□□□□ 0.59
NEK9-204ENST00000554258 ARNTLO00327 626 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 TRIM16O95361 564 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 OR1D2P34982 312 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 HSP90AA2PQ14568 343 aaPredicted RBP18.71■□□□□ 0.59
NEK9-204ENST00000554258 PRSS36Q5K4E3 855 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 PDXDC1Q6P996 788 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 TXNDC11Q6PKC3 985 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 TEX2Q8IWB9 1127 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 YAF2Q8IY57 180 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 NSUN7Q8NE18 718 aaKnown RBP18.71■□□□□ 0.59
NEK9-204ENST00000554258 TCEAL4Q96EI5 215 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 CACNG4Q9UBN1 327 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 SLC8A2Q9UPR5 921 aa18.71■□□□□ 0.59
NEK9-204ENST00000554258 V9GY48 417 aaPredicted RBP18.71■□□□□ 0.59
NEK9-204ENST00000554258 WDR27A2RRH5 827 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 SPECC1L-ADORA2AF8WAN1 911 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 ZNF197O14709 1029 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 CPLX1O14810 134 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 CDKL5O76039 1030 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 PRB1P04280 392 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 PON2Q15165 354 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 MFSD6LQ8IWD5 586 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 CCDC83Q8IWF9 413 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 CHCHD4Q8N4Q1 142 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 CORO1BQ9BR76 489 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 SH2D3AQ9BRG2 576 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 EIF2AQ9BY44 585 aaKnown RBP18.7■□□□□ 0.58
NEK9-204ENST00000554258 KIF26AQ9ULI4 1882 aaPredicted RBP18.7■□□□□ 0.58
NEK9-204ENST00000554258 STK36Q9NRP7 1315 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 PI4KAP42356 2102 aa18.7■□□□□ 0.58
NEK9-204ENST00000554258 TMEM150BA6NC51 233 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 LRG1P02750 347 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 FDPSP14324 419 aaKnown RBP18.69■□□□□ 0.58
NEK9-204ENST00000554258 CTHP32929 405 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 CCINQ13939 588 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 WWC2Q6AWC2 1192 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 SRGAP1Q7Z6B7 1085 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 RALGPS2Q86X27 583 aaPredicted RBP18.69■□□□□ 0.58
NEK9-204ENST00000554258 ZSWIM3Q96MP5 696 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 CEP89Q96ST8 783 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 NIFKQ9BYG3 293 aaKnown RBP18.69■□□□□ 0.58
NEK9-204ENST00000554258 CCDC86Q9H6F5 360 aaKnown RBP18.69■□□□□ 0.58
NEK9-204ENST00000554258 MINDY3Q9H8M7 445 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 GIT1Q9Y2X7 761 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 COL4A3BPQ9Y5P4 624 aa18.69■□□□□ 0.58
NEK9-204ENST00000554258 MYBPHLA2RUH7 354 aa18.68■□□□□ 0.58
NEK9-204ENST00000554258 MICAL2O94851 1124 aa18.68■□□□□ 0.58
NEK9-204ENST00000554258 PLA2G2AP14555 144 aa18.68■□□□□ 0.58
NEK9-204ENST00000554258 SSRP1Q08945 709 aaKnown RBP18.68■□□□□ 0.58
NEK9-204ENST00000554258 GRIK3Q13003 919 aa18.68■□□□□ 0.58
NEK9-204ENST00000554258 PFKFB3Q16875 520 aaPredicted RBP18.68■□□□□ 0.58
NEK9-204ENST00000554258 TYW1BQ6NUM6 668 aa18.68■□□□□ 0.58
NEK9-204ENST00000554258 PDZD4Q76G19 769 aaPredicted RBP18.68■□□□□ 0.58
NEK9-204ENST00000554258 HSCBQ8IWL3 235 aa18.68■□□□□ 0.58
NEK9-204ENST00000554258 PAAF1Q9BRP4 392 aa18.68■□□□□ 0.58
NEK9-204ENST00000554258 SLC26A6Q9BXS9 759 aa18.68■□□□□ 0.58
NEK9-204ENST00000554258 GON4LQ3T8J9 2241 aa18.68■□□□□ 0.58
NEK9-204ENST00000554258 HEPACAM2A8MVW5 462 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 DCLK1O15075 740 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 CHMP2AO43633 222 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 MAFO75444 373 aaPredicted RBP18.67■□□□□ 0.58
NEK9-204ENST00000554258 ERLIN2O94905 339 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 DEXIO95424 95 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 CYP3A4P08684 503 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 SRGAP2CP0DJJ0 459 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 KARSQ15046 597 aaKnown RBP18.67■□□□□ 0.58
NEK9-204ENST00000554258 PRR16Q569H4 304 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 XKR3Q5GH77 459 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 LARP1BQ659C4 914 aaKnown RBP18.67■□□□□ 0.58
NEK9-204ENST00000554258 PPP1R18Q6NYC8 613 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 PKN3Q6P5Z2 889 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 TRIM22Q8IYM9 498 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 HACE1Q8IYU2 909 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 GSTCDQ8NEC7 633 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 ZSCAN18Q8TBC5 510 aaPredicted RBP18.67■□□□□ 0.58
NEK9-204ENST00000554258 INTS4Q96HW7 963 aaKnown RBP18.67■□□□□ 0.58
NEK9-204ENST00000554258 SCUBE2Q9NQ36 999 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 NCANO14594 1321 aa18.67■□□□□ 0.58
NEK9-204ENST00000554258 PATE3B3GLJ2 98 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 CHADO15335 359 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 JAK2O60674 1132 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 KIF4AO95239 1232 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 GBP1P32455 592 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 CCR2P41597 374 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 SPIRE1Q08AE8 756 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 ELAVL2Q12926 359 aaKnown RBP18.66■□□□□ 0.58
NEK9-204ENST00000554258 CYP4A22Q5TCH4 519 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 TTC8Q8TAM2 541 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 JPH2Q9BR39 696 aaPredicted RBP18.66■□□□□ 0.58
NEK9-204ENST00000554258 TRIM6Q9C030 488 aaPredicted RBP18.66■□□□□ 0.58
NEK9-204ENST00000554258 TRPV4Q9HBA0 871 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 RAXQ9Y2V3 346 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 CDY1Q9Y6F8 540 aa18.66■□□□□ 0.58
NEK9-204ENST00000554258 SMCO2A6NFE2 343 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 hCG_1984214I3L0E3 225 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms