RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 CCL16O15467 120 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 NARSO43776 548 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 HNRNPA1P09651 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CXCL8P10145 99 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 RPL9P32969 192 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ZNF131P52739 623 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 NTHL1P78549 312 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CEBPZQ03701 1054 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SPAG1Q07617 926 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TCF15Q12870 199 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PPM1LQ5SGD2 360 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 GET4Q7L5D6 327 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 GRASPQ7Z6J2 395 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ALYREFQ86V81 257 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ST13P5Q8NFI4 369 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SLC7A14Q8TBB6 771 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ZHX3Q9H4I2 956 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PARVGQ9HBI0 331 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 IGSF9Q9P2J2 1179 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TUBGCP4Q9UGJ1 667 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TBX20Q9UMR3 447 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 BACE2Q9Y5Z0 518 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TCHHQ07283 1943 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 K7ENM7 598 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 HNRNPDLO14979 420 aaKnown RBP12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CLTAP09496 248 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 LAMP2P13473 410 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FSHRP23945 695 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 DDIT3P35638 169 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TNFSF9P41273 254 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 LIG4P49917 911 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 VARS2Q5ST30 1063 aaKnown RBP12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ZBTB41Q5SVQ8 909 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ANKS3Q6ZW76 656 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 LARP4BQ92615 738 aaKnown RBP12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CLIC6Q96NY7 704 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CCSER1Q9C0I3 900 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FBXO2Q9UK22 296 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 POLIQ9UNA4 740 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 DUSP12Q9UNI6 340 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 NUB1Q9Y5A7 615 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ZNF292O60281 2723 aa12.97□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TTC26A0AVF1 554 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 LACTBL1A8MY62 500 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TRAK2O60296 914 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 XYLBO75191 536 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TBCAO75347 108 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 NMT1P30419 496 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PTPN5P54829 565 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ARPP19P56211 112 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ENOX2Q16206 610 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 UVSSAQ2YD98 709 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SLC44A3Q8N4M1 653 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TMEM105Q8N8V8 129 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 KCNN1Q92952 543 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 INTS4Q96HW7 963 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FIZ1Q96SL8 496 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PHOX2BQ99453 314 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PRRX2Q99811 253 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MFSD1Q9H3U5 465 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 HCFC1R1Q9NWW0 138 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FBXL21Q9UKT6 434 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MTMR6Q9Y217 621 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SRPRBQ9Y5M8 271 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FAM186AA6NE01 2351 aa12.96□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CACNA1IQ9P0X4 2223 aa12.96□□□□□ -0.34
TRAPPC6B-204ENST00000554018 ANHXE9PGG2 379 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 SYN3O14994 580 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 FAM189A1O60320 539 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 TBC1D4O60343 1298 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 PIGRP01833 764 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 CFHP08603 1231 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 SCP2P22307 547 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 HOXA9P31269 272 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 MCM4P33991 863 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 MRE11P49959 708 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 GUCY2FP51841 1108 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 ROR1Q01973 937 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 HTR4Q13639 388 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 MRPL58Q14197 206 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 ZBTB6Q15916 424 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 ZC2HC1CQ53FD0 456 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 ASTLQ6HA08 431 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 SLC8B1Q6J4K2 584 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 SLC39A4Q6P5W5 647 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 DYMQ7RTS9 669 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 SIX5Q8N196 739 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 FLCNQ8NFG4 579 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 ZNF461Q8TAF7 563 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 ITFG1Q8TB96 612 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 KIF12Q96FN5 646 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 SUSD3Q96L08 255 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 MSTO1Q9BUK6 570 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 DNMT3BQ9UBC3 853 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 FBXL5Q9UKA1 691 aa12.95□□□□□ -0.34
TRAPPC6B-204ENST00000554018 A0A0B4J269 797 aa12.94□□□□□ -0.34
TRAPPC6B-204ENST00000554018 WDR27A2RRH5 827 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms