RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ACOT2P49753 483 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 ARPP19P56211 112 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 GTF2BQ00403 316 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 STK38Q15208 465 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 POTEHQ6S545 545 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 CCDC149Q6ZUS6 474 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 GET4Q7L5D6 327 aaPredicted RBP19.88■□□□□ 0.77
SHMT2-206ENST00000553529 KCTD17Q8N5Z5 321 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 KRI1Q8N9T8 703 aaKnown RBP19.88■□□□□ 0.77
SHMT2-206ENST00000553529 KIF12Q96FN5 646 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.88■□□□□ 0.77
SHMT2-206ENST00000553529 MTRRQ9UBK8 725 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 STK39Q9UEW8 545 aa19.88■□□□□ 0.77
SHMT2-206ENST00000553529 CLUHO75153 1309 aa19.87■□□□□ 0.77
SHMT2-206ENST00000553529 TTC26A0AVF1 554 aa19.87■□□□□ 0.77
SHMT2-206ENST00000553529 ZMYND10O75800 440 aa19.87■□□□□ 0.77
SHMT2-206ENST00000553529 PIGRP01833 764 aa19.87■□□□□ 0.77
SHMT2-206ENST00000553529 C8AP07357 584 aa19.87■□□□□ 0.77
SHMT2-206ENST00000553529 VARS2Q5ST30 1063 aaKnown RBP19.87■□□□□ 0.77
SHMT2-206ENST00000553529 SHC4Q6S5L8 630 aa19.87■□□□□ 0.77
SHMT2-206ENST00000553529 APBB1IPQ7Z5R6 666 aaPredicted RBP19.87■□□□□ 0.77
SHMT2-206ENST00000553529 GRASPQ7Z6J2 395 aaPredicted RBP19.87■□□□□ 0.77
SHMT2-206ENST00000553529 MAP4K3Q8IVH8 894 aa19.87■□□□□ 0.77
SHMT2-206ENST00000553529 SLC7A14Q8TBB6 771 aa19.87■□□□□ 0.77
SHMT2-206ENST00000553529 MSTO1Q9BUK6 570 aa19.87■□□□□ 0.77
SHMT2-206ENST00000553529 NOTCH4Q99466 2003 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 A0A0B4J269 797 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 SPTLC2O15270 562 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 PPP1R37O75864 691 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 ADSSP30520 456 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 GBP2P32456 591 aaPredicted RBP19.86■□□□□ 0.77
SHMT2-206ENST00000553529 STAT6P42226 847 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 JADE1Q6IE81 842 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 C15orf39Q6ZRI6 1047 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 CMASQ8NFW8 434 aaPredicted RBP19.86■□□□□ 0.77
SHMT2-206ENST00000553529 PBXIP1Q96AQ6 731 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 PRKD2Q9BZL6 878 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 ZSCAN16Q9H4T2 348 aaPredicted RBP19.86■□□□□ 0.77
SHMT2-206ENST00000553529 PIDD1Q9HB75 910 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 WDR6Q9NNW5 1121 aaKnown RBP19.86■□□□□ 0.77
SHMT2-206ENST00000553529 STK17AQ9UEE5 414 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 CCDC39Q9UFE4 941 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 DOCK8Q8NF50 2099 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 TSC2P49815 1807 aa19.86■□□□□ 0.77
SHMT2-206ENST00000553529 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.85■□□□□ 0.77
SHMT2-206ENST00000553529 WDR27A2RRH5 827 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 TULP1O00294 542 aaPredicted RBP19.85■□□□□ 0.77
SHMT2-206ENST00000553529 F13A1P00488 732 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 CLTAP09496 248 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 OR4Q2P0C623 313 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 IDEP14735 1019 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 MCM4P33991 863 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 ROR1Q01973 937 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 SIGLEC14Q08ET2 396 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 ZBTB6Q15916 424 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 E2F4Q16254 413 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 ZNF720Q7Z2F6 126 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 ZDHHC14Q8IZN3 488 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 UROC1Q96N76 676 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 RPP25Q9BUL9 199 aaKnown RBP19.85■□□□□ 0.77
SHMT2-206ENST00000553529 STRA6Q9BX79 667 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 SLC38A7Q9NVC3 462 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 CPSF3Q9UKF6 684 aaKnown RBP19.85■□□□□ 0.77
SHMT2-206ENST00000553529 POLIQ9UNA4 740 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 SORCS3Q9UPU3 1222 aa19.85■□□□□ 0.77
SHMT2-206ENST00000553529 SPTLC1O15269 473 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 OGTO15294 1046 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 SEC24AO95486 1093 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 ZSCAN22P10073 491 aaPredicted RBP19.84■□□□□ 0.77
SHMT2-206ENST00000553529 PPP2R3AQ06190 1150 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 RAB33AQ14088 237 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 AXDND1Q5T1B0 1012 aaPredicted RBP19.84■□□□□ 0.77
SHMT2-206ENST00000553529 CRELD2Q6UXH1 353 aaPredicted RBP19.84■□□□□ 0.77
SHMT2-206ENST00000553529 SV2BQ7L1I2 683 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 ITFG1Q8TB96 612 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 KCNN1Q92952 543 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 DHX58Q96C10 678 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 SAAL1Q96ER3 474 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 FBXL5Q9UKA1 691 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 HCN4Q9Y3Q4 1203 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 NUB1Q9Y5A7 615 aa19.84■□□□□ 0.77
SHMT2-206ENST00000553529 WDFY4Q6ZS81 3184 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 GOLGA8IPA6NC78 632 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 GOLGA8JA6NMD2 632 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 TBC1D4O60343 1298 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 PRPF6O94906 941 aaKnown RBP19.83■□□□□ 0.77
SHMT2-206ENST00000553529 DNM1Q05193 864 aaKnown RBP19.83■□□□□ 0.77
SHMT2-206ENST00000553529 ELAVL2Q12926 359 aaKnown RBP19.83■□□□□ 0.77
SHMT2-206ENST00000553529 PPM1LQ5SGD2 360 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 GPR65Q8IYL9 337 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 PRSS33Q8NF86 280 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 ING5Q8WYH8 240 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 TMEM209Q96SK2 561 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 PLEKHA4Q9H4M7 779 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 MRPL44Q9H9J2 332 aaKnown RBP19.83■□□□□ 0.77
SHMT2-206ENST00000553529 RPF1Q9H9Y2 349 aaKnown RBP19.83■□□□□ 0.77
SHMT2-206ENST00000553529 KCNK12Q9HB15 430 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 USTQ9Y2C2 406 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 ZDHHC9Q9Y397 364 aa19.83■□□□□ 0.77
SHMT2-206ENST00000553529 ZNF318Q5VUA4 2279 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms