RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CCT2P78371 535 aaKnown RBP6.58□□□□□ -1.36
SCAF11-213ENST00000550629 CCNA1P78396 465 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 AKAP17AQ02040 695 aaKnown RBP6.58□□□□□ -1.36
SCAF11-213ENST00000550629 MAP2K1Q02750 393 aaPredicted RBP6.58□□□□□ -1.36
SCAF11-213ENST00000550629 SSRP1Q08945 709 aaKnown RBP6.58□□□□□ -1.36
SCAF11-213ENST00000550629 STK3Q13188 491 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 GRM1Q13255 1194 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 SSPNQ14714 243 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 PFKFB3Q16875 520 aaPredicted RBP6.58□□□□□ -1.36
SCAF11-213ENST00000550629 SLC35G1Q2M3R5 365 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 TKFCQ3LXA3 575 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 BICRALQ6AI39 1079 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 POMZP3Q6PJE2 187 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 NOL8Q76FK4 1167 aaKnown RBP6.58□□□□□ -1.36
SCAF11-213ENST00000550629 RASGRP2Q7LDG7 609 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 CPNE8Q86YQ8 564 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 TMEM151BQ8IW70 566 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 DNAJC5GQ8N7S2 189 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 NECAB1Q8N987 351 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 SHCBP1Q8NEM2 672 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 REPS2Q8NFH8 660 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 GPRC5AQ8NFJ5 357 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 SMARCC2Q8TAQ2 1214 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 CCDC12Q8WUD4 166 aaPredicted RBP6.58□□□□□ -1.36
SCAF11-213ENST00000550629 PPP1R14AQ96A00 147 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 P2RX7Q99572 595 aaKnown RBP6.58□□□□□ -1.36
SCAF11-213ENST00000550629 AMNQ9BXJ7 453 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 UBA5Q9GZZ9 404 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 GLT8D2Q9H1C3 349 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 SH3GLB2Q9NR46 395 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 FBXO28Q9NVF7 368 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 CTDP1Q9Y5B0 961 aaPredicted RBP6.58□□□□□ -1.36
SCAF11-213ENST00000550629 ABCB11O95342 1321 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 PTPDC1A2A3K4 754 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 NOP56O00567 594 aaKnown RBP6.57□□□□□ -1.36
SCAF11-213ENST00000550629 N4BP3O15049 544 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 TLR2O60603 784 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 CTDNEP1O95476 244 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 SLC25A27O95847 323 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 CYP2C8P10632 490 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 SCG2P13521 617 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 PAMP19021 973 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 PDCP20941 246 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 STAT3P40763 770 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 HTRA3P83110 453 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 ST3GAL1Q11201 340 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 CRHR2Q13324 411 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 NR1I3Q14994 352 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 CDC37Q16543 378 aaPredicted RBP6.57□□□□□ -1.36
SCAF11-213ENST00000550629 FAM110CQ1W6H9 321 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 QRICH1Q2TAL8 776 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 PLEKHN1Q494U1 663 aaPredicted RBP6.57□□□□□ -1.36
SCAF11-213ENST00000550629 MCTP2Q6DN12 878 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 GTF2IRD2BQ6EKJ0 949 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 MRM1Q6IN84 353 aaKnown RBP6.57□□□□□ -1.36
SCAF11-213ENST00000550629 GALNT17Q6IS24 598 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 GTF2IRD2Q86UP8 949 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 RAB11FIP4Q86YS3 637 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 RIOX2Q8IUF8 465 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 CCDC83Q8IWF9 413 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 TRIM59Q8IWR1 403 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 SAMD3Q8N6K7 520 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 SLC43A3Q8NBI5 491 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 NSUN7Q8NE18 718 aaKnown RBP6.57□□□□□ -1.36
SCAF11-213ENST00000550629 COPS5Q92905 334 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 MRGPRX3Q96LB0 322 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 PIGSQ96S52 555 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 SLC26A6Q9BXS9 759 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 MROH8Q9H579 483 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 GPRC5CQ9NQ84 441 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 BARHL2Q9NY43 387 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 RBPJLQ9UBG7 517 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 FBXO40Q9UH90 709 aa6.57□□□□□ -1.36
SCAF11-213ENST00000550629 RLFQ13129 1914 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 ZNF536O15090 1300 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 NPHP3-ACAD11A0A0J9YXS1 232 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 ESYT2A0FGR8 921 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 STRNO43815 780 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 PPP1R11O60927 126 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-213ENST00000550629 CYBBP04839 570 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 HSP90AA1P07900 732 aaKnown RBP6.56□□□□□ -1.36
SCAF11-213ENST00000550629 XBP1P17861 261 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 CALML3P27482 149 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 MAPK4P31152 587 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 MAPKAPK2P49137 400 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 GHRHRQ02643 423 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 TMEM132BQ14DG7 1078 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 FXNQ16595 210 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 SNRNP48Q6IEG0 339 aaKnown RBP6.56□□□□□ -1.36
SCAF11-213ENST00000550629 ZC3H14Q6PJT7 736 aaKnown RBP6.56□□□□□ -1.36
SCAF11-213ENST00000550629 PAQR3Q6TCH7 311 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 C17orf99Q6UX52 265 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 ABRAQ8N0Z2 381 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 JMYQ8N9B5 988 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 CHST13Q8NET6 341 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 CCDC148Q8NFR7 591 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 MZB1Q8WU39 189 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 PHKBQ93100 1093 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 SIGLEC10Q96LC7 697 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 KCNC2Q96PR1 638 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms