RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 PDXKO00764 312 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 TRAPPC3O43617 180 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 NFICP08651 508 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 LRPAP1P30533 357 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 CA8P35219 290 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 GLUD2P49448 558 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 ELAVL2Q12926 359 aaKnown RBP14.57□□□□□ -0.08
PRPF19-204ENST00000539960 TMEM132DQ14C87 1099 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 PTPN14Q15678 1187 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 DUSP6Q16828 381 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 FAM171A1Q5VUB5 890 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 KIAA1841Q6NSI8 718 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 BRSK2Q8IWQ3 736 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 GUF1Q8N442 669 aaKnown RBP14.57□□□□□ -0.08
PRPF19-204ENST00000539960 XXYLT1Q8NBI6 393 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 C3orf58Q8NDZ4 430 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 BEST2Q8NFU1 509 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 NOC3LQ8WTT2 800 aaKnown RBP14.57□□□□□ -0.08
PRPF19-204ENST00000539960 TMEM174Q8WUU8 243 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 ERCC4Q92889 916 aaPredicted RBP14.57□□□□□ -0.08
PRPF19-204ENST00000539960 GTPBP4Q9BZE4 634 aaKnown RBP14.57□□□□□ -0.08
PRPF19-204ENST00000539960 RBAKQ9NYW8 714 aaPredicted RBP14.57□□□□□ -0.08
PRPF19-204ENST00000539960 MAPK8IP1Q9UQF2 711 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 C2CD2Q9Y426 696 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 REV3LO60673 3130 aa14.57□□□□□ -0.08
PRPF19-204ENST00000539960 TDRD15B5MCY1 1934 aaKnown RBP14.56□□□□□ -0.08
PRPF19-204ENST00000539960 PRUNE2Q8WUY3 3088 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 FSD2A1L4K1 749 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 TULP1O00294 542 aaPredicted RBP14.56□□□□□ -0.08
PRPF19-204ENST00000539960 C2CD2LO14523 706 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 URODP06132 367 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 LTBRP36941 435 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 CYP2J2P51589 502 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 WNT7BP56706 349 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 ZNF658Q5TYW1 1059 aaPredicted RBP14.56□□□□□ -0.08
PRPF19-204ENST00000539960 EP400NLQ6ZTU2 488 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 NT5DC4Q86YG4 428 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 CBWD2Q8IUF1 395 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 TMEM130Q8N3G9 435 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 RDH13Q8NBN7 331 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 B3GALT6Q96L58 329 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 GBP4Q96PP9 640 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 TTPALQ9BTX7 342 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 UBE2ZQ9H832 354 aaPredicted RBP14.56□□□□□ -0.08
PRPF19-204ENST00000539960 RXFP1Q9HBX9 757 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 PDE11AQ9HCR9 933 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 DMAC2Q9NW81 257 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 CLDND1Q9NY35 253 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 THEGQ9P2T0 379 aa14.56□□□□□ -0.08
PRPF19-204ENST00000539960 EYSQ5T1H1 3165 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 LINC01565O15544 149 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 EXOC3O60645 756 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 CLASP2O75122 1294 aaKnown RBP14.55□□□□□ -0.08
PRPF19-204ENST00000539960 CNPP09543 421 aaKnown RBP14.55□□□□□ -0.08
PRPF19-204ENST00000539960 FGFR3P22607 806 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 BRCC3P46736 316 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 GUCY2FP51841 1108 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 KCNC3Q14003 757 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 MYBPC2Q14324 1141 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 SURF1Q15526 300 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 SNRNP35Q16560 246 aaKnown RBP14.55□□□□□ -0.08
PRPF19-204ENST00000539960 TMEM184AQ6ZMB5 413 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 CEP57Q86XR8 500 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 SLC9A9Q8IVB4 645 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.55□□□□□ -0.08
PRPF19-204ENST00000539960 CACTINQ8WUQ7 758 aaKnown RBP14.55□□□□□ -0.08
PRPF19-204ENST00000539960 ATXN2LQ8WWM7 1075 aaKnown RBP14.55□□□□□ -0.08
PRPF19-204ENST00000539960 RIN2Q8WYP3 895 aaPredicted RBP14.55□□□□□ -0.08
PRPF19-204ENST00000539960 KLHL5Q96PQ7 755 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 EMILIN2Q9BXX0 1053 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 LMBRD1Q9NUN5 540 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 DPP3Q9NY33 737 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 TRAF3IP3Q9Y228 551 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 NUB1Q9Y5A7 615 aa14.55□□□□□ -0.08
PRPF19-204ENST00000539960 ANO9A1A5B4 782 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 I3L4J1 428 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 PIRO00625 290 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 CALUO43852 315 aaPredicted RBP14.54□□□□□ -0.08
PRPF19-204ENST00000539960 KCNA5P22460 613 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 PAX3P23760 479 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 KLRC2P26717 231 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 PRCPP42785 496 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 MRPS5P82675 430 aaKnown RBP14.54□□□□□ -0.08
PRPF19-204ENST00000539960 TFAMQ00059 246 aaKnown RBP14.54□□□□□ -0.08
PRPF19-204ENST00000539960 TFF2Q03403 129 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 DLX2Q07687 328 aaPredicted RBP14.54□□□□□ -0.08
PRPF19-204ENST00000539960 AAK1Q2M2I8 961 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 COBLL1Q53SF7 1204 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 RTP2Q5QGT7 225 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 C9orf57Q5W0N0 161 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.54□□□□□ -0.08
PRPF19-204ENST00000539960 EFCAB13Q8IY85 973 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 SMYD4Q8IYR2 804 aaPredicted RBP14.54□□□□□ -0.08
PRPF19-204ENST00000539960 VN1R2Q8NFZ6 395 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 LNX1Q8TBB1 728 aaPredicted RBP14.54□□□□□ -0.08
PRPF19-204ENST00000539960 SLC22A17Q8WUG5 538 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 SUSD3Q96L08 255 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 MFSD14AQ96MC6 490 aa14.54□□□□□ -0.08
PRPF19-204ENST00000539960 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.54□□□□□ -0.08
PRPF19-204ENST00000539960 FNIP2Q9P278 1114 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms