RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 C11orf84Q9BUA3 381 aaPredicted RBP23.1■■□□□ 1.29
CAPN1-220ENST00000530567 VN1R3Q9BXE9 311 aa23.1■■□□□ 1.29
CAPN1-220ENST00000530567 CARNS1A5YM72 827 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 EFEMP2O95967 443 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 PSMC2P35998 433 aaKnown RBP23.09■■□□□ 1.29
CAPN1-220ENST00000530567 MCCD1P59942 119 aaPredicted RBP23.09■■□□□ 1.29
CAPN1-220ENST00000530567 PLCB3Q01970 1234 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 TYRO3Q06418 890 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 SURF1Q15526 300 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 STX1AQ16623 288 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 C11orf57Q6ZUT1 292 aaPredicted RBP23.09■■□□□ 1.29
CAPN1-220ENST00000530567 C3orf58Q8NDZ4 430 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 OR5B17Q8NGF7 314 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 PARD3BQ8TEW8 1205 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 UROC1Q96N76 676 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 POP1Q99575 1024 aaKnown RBP23.09■■□□□ 1.29
CAPN1-220ENST00000530567 CGRRF1Q99675 332 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 FUCA2Q9BTY2 467 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 PRDM12Q9H4Q4 367 aa23.09■■□□□ 1.29
CAPN1-220ENST00000530567 ALG13Q9NP73 1137 aaKnown RBP23.09■■□□□ 1.29
CAPN1-220ENST00000530567 TMEM189-UBE2V1I3L0A0 370 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 PODXLO00592 558 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 GRM6O15303 877 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 SLC16A3O15427 465 aaKnown RBP23.08■■□□□ 1.29
CAPN1-220ENST00000530567 DNAJB1P25685 340 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 ERCC5P28715 1186 aaPredicted RBP23.08■■□□□ 1.29
CAPN1-220ENST00000530567 CLDN10P78369 228 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 TFAMQ00059 246 aaKnown RBP23.08■■□□□ 1.29
CAPN1-220ENST00000530567 GPM6BQ13491 265 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 C1orf220Q5T0J3 134 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 SCARA3Q6AZY7 606 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 WDR49Q8IV35 697 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 CSGALNACT2Q8N6G5 542 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 BEST2Q8NFU1 509 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 CXorf38Q8TB03 319 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 SPPL3Q8TCT6 385 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 DDX27Q96GQ7 796 aaKnown RBP23.08■■□□□ 1.29
CAPN1-220ENST00000530567 CEP63Q96MT8 703 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 MTMR12Q9C0I1 747 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 INTS13Q9NVM9 706 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 ANO10Q9NW15 660 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 DACH1Q9UI36 760 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.08■■□□□ 1.29
CAPN1-220ENST00000530567 ATG2AQ2TAZ0 1938 aa23.08■■□□□ 1.29
CAPN1-220ENST00000530567 LRRIQ3A6PVS8 624 aaPredicted RBP23.08■■□□□ 1.28
CAPN1-220ENST00000530567 PPEF2O14830 753 aa23.08■■□□□ 1.28
CAPN1-220ENST00000530567 XPOTO43592 962 aaKnown RBP23.08■■□□□ 1.28
CAPN1-220ENST00000530567 DLATP10515 647 aaKnown RBP23.08■■□□□ 1.28
CAPN1-220ENST00000530567 RPL9P32969 192 aaKnown RBP23.08■■□□□ 1.28
CAPN1-220ENST00000530567 DLG4P78352 724 aa23.08■■□□□ 1.28
CAPN1-220ENST00000530567 CAMK1Q14012 370 aa23.08■■□□□ 1.28
CAPN1-220ENST00000530567 CT47A1Q5JQC4 288 aaPredicted RBP23.08■■□□□ 1.28
CAPN1-220ENST00000530567 RNF168Q8IYW5 571 aaPredicted RBP23.08■■□□□ 1.28
CAPN1-220ENST00000530567 C1orf127Q8N9H9 656 aa23.08■■□□□ 1.28
CAPN1-220ENST00000530567 TMC2Q8TDI7 906 aa23.08■■□□□ 1.28
CAPN1-220ENST00000530567 ZNF516Q92618 1163 aa23.08■■□□□ 1.28
CAPN1-220ENST00000530567 COLEC11Q9BWP8 271 aa23.08■■□□□ 1.28
CAPN1-220ENST00000530567 ANO9A1A5B4 782 aa23.07■■□□□ 1.28
CAPN1-220ENST00000530567 SYCE3A1L190 88 aa23.07■■□□□ 1.28
CAPN1-220ENST00000530567 TULP1O00294 542 aaPredicted RBP23.07■■□□□ 1.28
CAPN1-220ENST00000530567 EPB41P11171 864 aaKnown RBP23.07■■□□□ 1.28
CAPN1-220ENST00000530567 ENPEPQ07075 957 aa23.07■■□□□ 1.28
CAPN1-220ENST00000530567 C9orf57Q5W0N0 161 aa23.07■■□□□ 1.28
CAPN1-220ENST00000530567 INTS8Q75QN2 995 aaKnown RBP23.07■■□□□ 1.28
CAPN1-220ENST00000530567 HASPINQ8TF76 798 aa23.07■■□□□ 1.28
CAPN1-220ENST00000530567 TMEM169Q96HH4 297 aa23.07■■□□□ 1.28
CAPN1-220ENST00000530567 FNBP1Q96RU3 617 aa23.07■■□□□ 1.28
CAPN1-220ENST00000530567 DPP3Q9NY33 737 aa23.07■■□□□ 1.28
CAPN1-220ENST00000530567 ADAM28Q9UKQ2 775 aa23.07■■□□□ 1.28
CAPN1-220ENST00000530567 SCN1AP35498 2009 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 B3GAT3O94766 335 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 LETM1O95202 739 aaPredicted RBP23.06■■□□□ 1.28
CAPN1-220ENST00000530567 VAMP7P51809 220 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 BFSP1Q12934 665 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 ADGRE1Q14246 886 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 ZSCAN23Q3MJ62 389 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 DCLRE1AQ6PJP8 1040 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 FILIP1Q7Z7B0 1213 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 DEFB123Q8N688 67 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 POF1BQ8WVV4 589 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 GUCD1Q96NT3 240 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 SIX4Q9UIU6 781 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 LZTS1Q9Y250 596 aa23.06■■□□□ 1.28
CAPN1-220ENST00000530567 PIRO00625 290 aa23.05■■□□□ 1.28
CAPN1-220ENST00000530567 TMEM191BP0C7N4 346 aa23.05■■□□□ 1.28
CAPN1-220ENST00000530567 TRIM49P0CI25 452 aa23.05■■□□□ 1.28
CAPN1-220ENST00000530567 TRIM49CP0CI26 452 aa23.05■■□□□ 1.28
CAPN1-220ENST00000530567 UBE3AQ05086 875 aa23.05■■□□□ 1.28
CAPN1-220ENST00000530567 DUOXA2Q1HG44 320 aa23.05■■□□□ 1.28
CAPN1-220ENST00000530567 FUT10Q6P4F1 479 aa23.05■■□□□ 1.28
CAPN1-220ENST00000530567 DDX53Q86TM3 631 aaKnown RBP23.05■■□□□ 1.28
CAPN1-220ENST00000530567 CACTINQ8WUQ7 758 aaKnown RBP23.05■■□□□ 1.28
CAPN1-220ENST00000530567 SRRTQ9BXP5 876 aaKnown RBP23.05■■□□□ 1.28
CAPN1-220ENST00000530567 GPR62Q9BZJ7 368 aa23.05■■□□□ 1.28
CAPN1-220ENST00000530567 DNAJC25Q9H1X3 360 aa23.05■■□□□ 1.28
CAPN1-220ENST00000530567 MTMR10Q9NXD2 777 aa23.05■■□□□ 1.28
CAPN1-220ENST00000530567 TNNI1P19237 187 aa23.04■■□□□ 1.28
CAPN1-220ENST00000530567 IRF2BP1Q8IU81 584 aa23.04■■□□□ 1.28
CAPN1-220ENST00000530567 ANKRD36BP1Q96IX9 119 aa23.04■■□□□ 1.28
CAPN1-220ENST00000530567 ITGA11Q9UKX5 1188 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms