RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 CLCA1A8K7I4 914 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 CXorf49A8MYA2 514 aaPredicted RBP4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 TBX3O15119 743 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 CNOT4O95628 575 aaKnown RBP4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 CD1AP06126 327 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 GNAI3P08754 354 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 TSHRP16473 764 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 ATP5JP18859 108 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 FPR1P21462 350 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 SLC7A1P30825 629 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 CASRP41180 1078 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 SLURP1P55000 103 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 CLRN1P58418 232 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 GNAI1P63096 354 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 RIN1Q13671 783 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 RNF151Q2KHN1 245 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 TMEM95Q3KNT9 176 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 MFSD14BQ5SR56 506 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 TCERG1LQ5VWI1 586 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 AFMIDQ63HM1 303 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 PPP1R3BQ86XI6 285 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 MYLK4Q86YV6 388 aaPredicted RBP4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 SDR16C5Q8N3Y7 309 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 SHCBP1Q8NEM2 672 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 OR10H5Q8NGA6 315 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 OR6B3Q8NGW1 331 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 PARD3BQ8TEW8 1205 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 SCAMP4Q969E2 229 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 ARL8AQ96BM9 186 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 TRIM43Q96BQ3 446 aaPredicted RBP4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 NT5C1BQ96P26 610 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 FMNL2Q96PY5 1086 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 TBCBQ99426 244 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 TCF25Q9BQ70 676 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 BRIP1Q9BX63 1249 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 ZNF518BQ9C0D4 1074 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 WDR12Q9GZL7 423 aaKnown RBP4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 SLC23A1Q9UHI7 598 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 ZDHHC9Q9Y397 364 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 DAAM1Q9Y4D1 1078 aa4.05□□□□□ -1.76
RNU6-390P-201ENST00000516259 USP19O94966 1318 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 A0A1W2PPC4 97 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 PRSS29PA6NIE9 313 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 HNRNPDLO14979 420 aaKnown RBP4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 AREL1O15033 823 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 GRM6O15303 877 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 B4GALT3O60512 393 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 HAUS5O94927 633 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 ABHD16AO95870 558 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 FOSP01100 380 aaPredicted RBP4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 RARBP10826 455 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 CR2P20023 1033 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 TNFSF4P23510 183 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 MGAT1P26572 445 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 RAP1GAPP47736 663 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 ALDH1A3P47895 512 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 RRADP55042 308 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 SOX8P57073 446 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 PPP2CBP62714 309 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 PPP2CAP67775 309 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 POU6F2P78424 691 aaPredicted RBP4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 HTRA4P83105 476 aaPredicted RBP4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 DUSP8Q13202 625 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 SLC44A4Q53GD3 710 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 INO80DQ53TQ3 878 aaPredicted RBP4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 CCDC93Q567U6 631 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 HSP90AB4PQ58FF6 505 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 XRRA1Q6P2D8 792 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 FAM111BQ6SJ93 734 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 ZNF783Q6ZMS7 281 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 ZNF365Q70YC5 407 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 FAM83AQ86UY5 434 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 SP8Q8IXZ3 490 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 REPS2Q8NFH8 660 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 OR14K1Q8NGZ2 314 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 ZFP28Q8NHY6 868 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 MDM1Q8TC05 714 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 ZNF384Q8TF68 577 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 NEIL1Q96FI4 390 aaPredicted RBP4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 CEP95Q96GE4 821 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 RPL10LQ96L21 214 aaKnown RBP4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 MRI1Q9BV20 369 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 BRD9Q9H8M2 597 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 ARMT1Q9H993 441 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 SMURF2Q9HAU4 748 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 OAZ3Q9UMX2 235 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 LRCH1Q9Y2L9 728 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 PLEKHM1Q9Y4G2 1056 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 PCDHA1Q9Y5I3 950 aa4.04□□□□□ -1.76
RNU6-390P-201ENST00000516259 UBE2QL1A1L167 161 aa4.03□□□□□ -1.76
RNU6-390P-201ENST00000516259 MBD3L4A6NDZ8 208 aaPredicted RBP4.03□□□□□ -1.76
RNU6-390P-201ENST00000516259 MBD3L3A6NE82 208 aaPredicted RBP4.03□□□□□ -1.76
RNU6-390P-201ENST00000516259 POMCP01189 267 aa4.03□□□□□ -1.76
RNU6-390P-201ENST00000516259 CYP2C9P11712 490 aa4.03□□□□□ -1.76
RNU6-390P-201ENST00000516259 BRAFP15056 766 aa4.03□□□□□ -1.76
RNU6-390P-201ENST00000516259 STT3AP46977 705 aa4.03□□□□□ -1.76
RNU6-390P-201ENST00000516259 KCNC1P48547 511 aa4.03□□□□□ -1.76
RNU6-390P-201ENST00000516259 SUMO3P55854 103 aaPredicted RBP4.03□□□□□ -1.76
RNU6-390P-201ENST00000516259 WNT3P56703 355 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms