RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FOXL1Q12952 345 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 GRM7Q14831 915 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 SURF1Q15526 300 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 BMT2Q1RMZ1 405 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 PABPC1LQ4VXU2 614 aaKnown RBP4.35□□□□□ -1.71
LSM6-205ENST00000507449 FKBP15Q5T1M5 1219 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 ZNF529Q6P280 563 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 DOK3Q7L591 496 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 UBE3BQ7Z3V4 1068 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 GGNQ86UU5 652 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 FUKQ8N0W3 1084 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 KRT78Q8N1N4 520 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 IL17RDQ8NFM7 739 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 PARD3BQ8TEW8 1205 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 ARL8AQ96BM9 186 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 C20orf173Q96LM9 149 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 OR14A2Q96R54 314 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 STRBPQ96SI9 672 aaKnown RBP4.35□□□□□ -1.71
LSM6-205ENST00000507449 NELFAQ9H3P2 528 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 WDR26Q9H7D7 661 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 CPA4Q9UI42 421 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 PHTF1Q9UMS5 762 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 SLC45A2Q9UMX9 530 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 PCDHA6Q9UN73 950 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 SLC30A1Q9Y6M5 507 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 TBKBP1A7MCY6 615 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 B5MCH6 92 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 KIAA0391O15091 583 aaKnown RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 SLC43A1O75387 559 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 RAD17O75943 681 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 NBPF7P0C2Y1 421 aaPredicted RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 KITP10721 976 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 HDCP19113 662 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 SMARCA1P28370 1054 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 MSX2P35548 267 aaPredicted RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 RPS19P39019 145 aaKnown RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 PIK3CBP42338 1070 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 TM4SF4P48230 202 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 ALDH5A1P51649 535 aaPredicted RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 CLRN1P58418 232 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 PTH1RQ03431 593 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 PICALMQ13492 652 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 HDAC1Q13547 482 aaPredicted RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 POLD3Q15054 466 aaPredicted RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 CCDC93Q567U6 631 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 ZFYVE27Q5T4F4 411 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 EMC10Q5UCC4 262 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 C1QL3Q5VWW1 255 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 SPTY2D1Q68D10 685 aaPredicted RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 LIMS2Q7Z4I7 341 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 ELOA2Q8IYF1 753 aaPredicted RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 SAMD3Q8N6K7 520 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 RNF169Q8NCN4 708 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 OR52N2Q8NGI0 321 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 MTFMTQ96DP5 389 aaKnown RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 APIPQ96GX9 242 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 RPS6KC1Q96S38 1066 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 MPHOSPH6Q99547 160 aaKnown RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 RSAD1Q9HA92 442 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 SIDT1Q9NXL6 827 aaKnown RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 FNIP2Q9P278 1114 aa4.34□□□□□ -1.71
LSM6-205ENST00000507449 HECAQ9UBI9 543 aaPredicted RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 ZFR2Q9UPR6 939 aaKnown RBP4.34□□□□□ -1.71
LSM6-205ENST00000507449 A0A1W2PPL8 197 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 TBX3O15119 743 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 PHGDHO43175 533 aaKnown RBP4.33□□□□□ -1.72
LSM6-205ENST00000507449 SNRPA1P09661 255 aaKnown RBP4.33□□□□□ -1.72
LSM6-205ENST00000507449 MTHFD1P11586 935 aaKnown RBP4.33□□□□□ -1.72
LSM6-205ENST00000507449 SLC6A2P23975 617 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 PHKA1P46020 1223 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 PIK3CGP48736 1102 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 ARFIP2P53365 341 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 RAP2BP61225 183 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 EXOSC9Q06265 439 aaKnown RBP4.33□□□□□ -1.72
LSM6-205ENST00000507449 ELAVL1Q15717 326 aaKnown RBP4.33□□□□□ -1.72
LSM6-205ENST00000507449 ZXDCQ2QGD7 858 aaPredicted RBP4.33□□□□□ -1.72
LSM6-205ENST00000507449 KHDC1LQ5JSQ8 128 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 APBB1IPQ7Z5R6 666 aaPredicted RBP4.33□□□□□ -1.72
LSM6-205ENST00000507449 SYT12Q8IV01 421 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 GIMAP8Q8ND71 665 aaPredicted RBP4.33□□□□□ -1.72
LSM6-205ENST00000507449 P2RX7Q99572 595 aaKnown RBP4.33□□□□□ -1.72
LSM6-205ENST00000507449 EPC1Q9H2F5 836 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 KLHL11Q9NVR0 708 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 STK32BQ9NY57 414 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 RTEL1Q9NZ71 1219 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 FAM30AQ9NZY2 134 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.33□□□□□ -1.72
LSM6-205ENST00000507449 TPCN1Q9ULQ1 816 aa4.33□□□□□ -1.72
LSM6-205ENST00000507449 ZNF536O15090 1300 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 NPEPPSL1A6NEC2 478 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 PATE3B3GLJ2 98 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 PRSS23O95084 383 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 AMHP03971 560 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 GNAT2P19087 354 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 PRIM2P49643 509 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 PTTG1IPP53801 180 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 SOX8P57073 446 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 CREMQ03060 361 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 BIRC2Q13490 618 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 KIF22Q14807 665 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms