RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 KIAA1586Q9HCI6 787 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 DZANK1Q9NVP4 752 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 TUBGCP4Q9UGJ1 667 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 DPP7Q9UHL4 492 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 NUB1Q9Y5A7 615 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 UNC80Q8N2C7 3258 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 REV3LO60673 3130 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 H3BQ06 376 aaPredicted RBP18.11■□□□□ 0.49
SNCA-209ENST00000506244 CLASP2O75122 1294 aaKnown RBP18.11■□□□□ 0.49
SNCA-209ENST00000506244 GLP2RO95838 553 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 KLRC2P26717 231 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 LRPAP1P30533 357 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 LTBRP36941 435 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 DPYDQ12882 1025 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 KNOP1Q1ED39 458 aaKnown RBP18.11■□□□□ 0.49
SNCA-209ENST00000506244 FAM171A1Q5VUB5 890 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 RIN2Q8WYP3 895 aaPredicted RBP18.11■□□□□ 0.49
SNCA-209ENST00000506244 SAAL1Q96ER3 474 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 TIGD1Q96MW7 591 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 CBWD1Q9BRT8 395 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 IKZF4Q9H2S9 585 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 AGPAT3Q9NRZ7 376 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 RBAKQ9NYW8 714 aaPredicted RBP18.11■□□□□ 0.49
SNCA-209ENST00000506244 CD207Q9UJ71 328 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 HCFC2Q9Y5Z7 792 aa18.11■□□□□ 0.49
SNCA-209ENST00000506244 KINO60870 393 aaKnown RBP18.1■□□□□ 0.49
SNCA-209ENST00000506244 LILRB3O75022 631 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 RHOBTB3O94955 611 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 CNPP09543 421 aaKnown RBP18.1■□□□□ 0.49
SNCA-209ENST00000506244 PRR29P0C7W0 189 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 HOXB8P17481 243 aaPredicted RBP18.1■□□□□ 0.49
SNCA-209ENST00000506244 PAX3P23760 479 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 SMAD4Q13485 552 aaKnown RBP18.1■□□□□ 0.49
SNCA-209ENST00000506244 KCNB1Q14721 858 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 ZBTB6Q15916 424 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 KIAA0319Q5VV43 1072 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 JADE1Q6IE81 842 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 PTCRAQ6ISU1 281 aaPredicted RBP18.1■□□□□ 0.49
SNCA-209ENST00000506244 LLGL2Q6P1M3 1020 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 TAS1R1Q7RTX1 841 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 NELFCDQ8IXH7 590 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 NOC3LQ8WTT2 800 aaKnown RBP18.1■□□□□ 0.49
SNCA-209ENST00000506244 PIK3R5Q8WYR1 880 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 KLHL5Q96PQ7 755 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 RXFP1Q9HBX9 757 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 RMND1Q9NWS8 449 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 HSPBP1Q9NZL4 362 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 FNIP2Q9P278 1114 aa18.1■□□□□ 0.49
SNCA-209ENST00000506244 BARX2Q9UMQ3 279 aaPredicted RBP18.1■□□□□ 0.49
SNCA-209ENST00000506244 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 SYN3O14994 580 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 SMC2O95347 1197 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 C1RP00736 705 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 NFICP08651 508 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 MCM4P33991 863 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 HOXD13P35453 343 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 KCNQ1P51787 676 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 SPAG1Q07617 926 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 STK4Q13043 487 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 SNW1Q13573 536 aaKnown RBP18.09■□□□□ 0.49
SNCA-209ENST00000506244 KCNC3Q14003 757 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 SURF1Q15526 300 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 SPATA1Q5VX52 437 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 CRELD2Q6UXH1 353 aaPredicted RBP18.09■□□□□ 0.49
SNCA-209ENST00000506244 CEP57Q86XR8 500 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 C12orf56Q8IXR9 622 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 SMRP1Q8NCR6 262 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 KIAA0895Q8NCT3 520 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 C3orf58Q8NDZ4 430 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 ENGASEQ8NFI3 743 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 VN1R2Q8NFZ6 395 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 MSLNLQ96KJ4 702 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 GTPBP4Q9BZE4 634 aaKnown RBP18.09■□□□□ 0.49
SNCA-209ENST00000506244 PCIF1Q9H4Z3 704 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 CLEC1BQ9P126 229 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 ANK1P16157 1881 aa18.09■□□□□ 0.49
SNCA-209ENST00000506244 XIRP2A4UGR9 3374 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 ARHGEF37A1IGU5 675 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 ZNF233A6NK53 670 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 TEX28O15482 410 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 TGFB1I1O43294 461 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 GLUD1P00367 558 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 FGFR3P22607 806 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 DLX2Q07687 328 aaPredicted RBP18.08■□□□□ 0.48
SNCA-209ENST00000506244 PSMD5Q16401 504 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 RTP2Q5QGT7 225 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 ANKRD54Q6NXT1 300 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 ANKS3Q6ZW76 656 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.08■□□□□ 0.48
SNCA-209ENST00000506244 B3GALT6Q96L58 329 aa18.08■□□□□ 0.48
SNCA-209ENST00000506244 GOLGA8IPA6NC78 632 aa18.07■□□□□ 0.48
SNCA-209ENST00000506244 GOLGA8JA6NMD2 632 aa18.07■□□□□ 0.48
SNCA-209ENST00000506244 BRCC3P46736 316 aa18.07■□□□□ 0.48
SNCA-209ENST00000506244 CLCN4P51793 760 aa18.07■□□□□ 0.48
SNCA-209ENST00000506244 UBE2HP62256 183 aa18.07■□□□□ 0.48
SNCA-209ENST00000506244 CLUL1Q15846 466 aa18.07■□□□□ 0.48
SNCA-209ENST00000506244 ELOA2Q8IYF1 753 aaPredicted RBP18.07■□□□□ 0.48
SNCA-209ENST00000506244 XXYLT1Q8NBI6 393 aa18.07■□□□□ 0.48
SNCA-209ENST00000506244 APPL2Q8NEU8 664 aa18.07■□□□□ 0.48
SNCA-209ENST00000506244 ADAMTS19Q8TE59 1207 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms