RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 TTC28Q96AY4 2481 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 B3GALT6Q96L58 329 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 TTPALQ9BTX7 342 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 PCIF1Q9H4Z3 704 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 ASB7Q9H672 318 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.75□□□□□ -0.37
MRPL55-234ENST00000497758 RBAKQ9NYW8 714 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-234ENST00000497758 BARX2Q9UMQ3 279 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-234ENST00000497758 FAM50BQ9Y247 325 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 DERAQ9Y315 318 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 VCANP13611 3396 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 CUL9Q8IWT3 2517 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 GOLGA8IPA6NC78 632 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 GOLGA8JA6NMD2 632 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 KINO60870 393 aaKnown RBP12.74□□□□□ -0.37
MRPL55-234ENST00000497758 KIF20AO95235 890 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 EFEMP2O95967 443 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 NFICP08651 508 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 CNPP09543 421 aaKnown RBP12.74□□□□□ -0.37
MRPL55-234ENST00000497758 CYP3A5P20815 502 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 HOXD13P35453 343 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 LTBRP36941 435 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 SNRPFP62306 86 aaKnown RBP12.74□□□□□ -0.37
MRPL55-234ENST00000497758 STK4Q13043 487 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 KNOP1Q1ED39 458 aaKnown RBP12.74□□□□□ -0.37
MRPL55-234ENST00000497758 BMT2Q1RMZ1 405 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 KIAA0319Q5VV43 1072 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 PDXDC1Q6P996 788 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 ELMSAN1Q6PJG2 1045 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-234ENST00000497758 GPR65Q8IYL9 337 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 GPD1LQ8N335 351 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 GOLGA5Q8TBA6 731 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 CASP10Q92851 521 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 AGPAT3Q9NRZ7 376 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 CHST7Q9NS84 486 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 RMND1Q9NWS8 449 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 HSPBP1Q9NZL4 362 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 CGNQ9P2M7 1197 aaKnown RBP12.74□□□□□ -0.37
MRPL55-234ENST00000497758 CD207Q9UJ71 328 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 C2CD2Q9Y426 696 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 HCFC2Q9Y5Z7 792 aa12.74□□□□□ -0.37
MRPL55-234ENST00000497758 SPTBN5Q9NRC6 3674 aaKnown RBP12.73□□□□□ -0.37
MRPL55-234ENST00000497758 TRIP11Q15643 1979 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 SMC2O95347 1197 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 GLP2RO95838 553 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 ADRB2P07550 413 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 MCM4P33991 863 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 CYP2J2P51589 502 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 RBM10P98175 930 aaKnown RBP12.73□□□□□ -0.37
MRPL55-234ENST00000497758 DLX2Q07687 328 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-234ENST00000497758 PNOCQ13519 176 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 SNW1Q13573 536 aaKnown RBP12.73□□□□□ -0.37
MRPL55-234ENST00000497758 KCNB1Q14721 858 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 PTCRAQ6ISU1 281 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-234ENST00000497758 CRELD2Q6UXH1 353 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-234ENST00000497758 BRSK2Q8IWQ3 736 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 KIAA0895Q8NCT3 520 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 C3orf58Q8NDZ4 430 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 ENGASEQ8NFI3 743 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 VN1R2Q8NFZ6 395 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 TIGD1Q96MW7 591 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 KLHL5Q96PQ7 755 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 KIAA1586Q9HCI6 787 aa12.73□□□□□ -0.37
MRPL55-234ENST00000497758 ZNF233A6NK53 670 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 I3L4J1 428 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 CLIC2O15247 247 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 TEX28O15482 410 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 TGFB1I1O43294 461 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 LILRB3O75022 631 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 GADD45BO75293 160 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-234ENST00000497758 RHOBTB3O94955 611 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 HOXB8P17481 243 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-234ENST00000497758 LRPAP1P30533 357 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 BRCC3P46736 316 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 GUCY2FP51841 1108 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 TFAMQ00059 246 aaKnown RBP12.72□□□□□ -0.37
MRPL55-234ENST00000497758 SMAD4Q13485 552 aaKnown RBP12.72□□□□□ -0.37
MRPL55-234ENST00000497758 ZBTB6Q15916 424 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 PSMD5Q16401 504 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 RTP2Q5QGT7 225 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 SPATA1Q5VX52 437 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 ANKRD54Q6NXT1 300 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 PRSS55Q6UWB4 352 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-234ENST00000497758 TMEM184AQ6ZMB5 413 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 NT5DC4Q86YG4 428 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 XXYLT1Q8NBI6 393 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 ZSWIM2Q8NEG5 633 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 CACTINQ8WUQ7 758 aaKnown RBP12.72□□□□□ -0.37
MRPL55-234ENST00000497758 PIK3R5Q8WYR1 880 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 IPO9Q96P70 1041 aaKnown RBP12.72□□□□□ -0.37
MRPL55-234ENST00000497758 RXFP1Q9HBX9 757 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 DZANK1Q9NVP4 752 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 CLEC1BQ9P126 229 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 DPP7Q9UHL4 492 aa12.72□□□□□ -0.37
MRPL55-234ENST00000497758 SYN3O14994 580 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 EXOC3O60645 756 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 GLUD1P00367 558 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 BMP1P13497 986 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms