RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ANKZF1Q9H8Y5 726 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 SUGCTQ9HAC7 445 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 RRAGCQ9HB90 399 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 CTTNBP2NLQ9P2B4 639 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 UVRAGQ9P2Y5 699 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 MORF4L1Q9UBU8 362 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 RASAL2Q9UJF2 1139 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 CEP83Q9Y592 693 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 ADGRA3Q8IWK6 1321 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 TISP43B9A030 160 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 INO80B-WBP1J3KQ70 363 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 FOXN3O00409 490 aaPredicted RBP7.42□□□□□ -1.22
USP39-219ENST00000496047 HLA-DRAP01903 254 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 P4HA1P13674 534 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 ADORA2AP29274 412 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 ADSSP30520 456 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 CETN2P41208 172 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 DNA2P51530 1060 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 EPHB4P54760 987 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 CDC42EP1Q00587 391 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 CDR2Q01850 454 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 POU5F1BQ06416 359 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 LAMTOR4Q0VGL1 99 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 PRPF4BQ13523 1007 aaKnown RBP7.42□□□□□ -1.22
USP39-219ENST00000496047 PLCB4Q15147 1175 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 ZACNQ401N2 412 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 TJAP1Q5JTD0 557 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 SLC39A4Q6P5W5 647 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 MPZL3Q6UWV2 235 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 SV2AQ7L0J3 742 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 PLEKHH3Q7Z736 793 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 RHPN2Q8IUC4 686 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 CREG2Q8IUH2 290 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 FAM71AQ8IYT1 594 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 RNF149Q8NC42 400 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 PPTC7Q8NI37 304 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 SLC30A5Q8TAD4 765 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 LMO3Q8TAP4 145 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 LNX1Q8TBB1 728 aaPredicted RBP7.42□□□□□ -1.22
USP39-219ENST00000496047 ACTRT1Q8TDG2 376 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 EPS8L1Q8TE68 723 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 MAIP1Q8WWC4 291 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.42□□□□□ -1.22
USP39-219ENST00000496047 ZNF653Q96CK0 615 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 NLRP4Q96MN2 994 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 TARS2Q9BW92 718 aaKnown RBP7.42□□□□□ -1.22
USP39-219ENST00000496047 TLR10Q9BXR5 811 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 PACSIN1Q9BY11 444 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 NFKBIZQ9BYH8 718 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 INO80BQ9C086 356 aaPredicted RBP7.42□□□□□ -1.22
USP39-219ENST00000496047 VIPAS39Q9H9C1 493 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 EFCC1Q9HA90 598 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 TXNRD2Q9NNW7 524 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 ZCCHC17Q9NP64 241 aaKnown RBP7.42□□□□□ -1.22
USP39-219ENST00000496047 STIM2Q9P246 746 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 AJAP1Q9UKB5 411 aaPredicted RBP7.42□□□□□ -1.22
USP39-219ENST00000496047 GTF3C4Q9UKN8 822 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 AKT3Q9Y243 479 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 PCDHB2Q9Y5E7 798 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 SCINQ9Y6U3 715 aa7.42□□□□□ -1.22
USP39-219ENST00000496047 A0A0B4J269 797 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 CCDC66A2RUB6 948 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 RRN3P2A6NIE6 340 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 SLC15A5A6NIM6 579 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 BTBD19C9JJ37 291 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 ACKR2O00590 384 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 ZNF185O15231 689 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 NCK2O43639 380 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 SPOPO43791 374 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 CEP104O60308 925 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 AP1G2O75843 785 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 ERLIN2O94905 339 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 ZRANB2O95218 330 aaKnown RBP eCLIP7.41□□□□□ -1.22
USP39-219ENST00000496047 CELF2O95319 508 aaKnown RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 LGALS2P05162 132 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 SRGAP2CP0DJJ0 459 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 CYP11B1P15538 503 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 ZSCAN20P17040 1043 aaPredicted RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 ATP4AP20648 1035 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 TNFRSF8P28908 595 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 NSFP46459 744 aaKnown RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 ACOT2P49753 483 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 SOX10P56693 466 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 NLRP11P59045 1033 aaKnown RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 CLDN10P78369 228 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 CBX1P83916 185 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 POU5F1Q01860 360 aaKnown RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 MOGSQ13724 837 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 TCEAL1Q15170 157 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 ZNF792Q3KQV3 632 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 HSDL1Q3SXM5 330 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 HABP4Q5JVS0 413 aaKnown RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 ATF7IP2Q5U623 682 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 EFCAB12Q6NXP0 572 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 CCDC62Q6P9F0 684 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 MAATS1Q7Z4T9 603 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 GPR142Q7Z601 462 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 METTL13Q8N6R0 699 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 OR6J1Q8NGC5 347 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 SLC35G2Q8TBE7 412 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms