RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CES2O00748 559 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 SMIM10L2AP0DMW4 78 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 SMIM10L2BP0DMW5 78 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 MYL6P60660 151 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 GPC5P78333 572 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 PEX26Q7Z412 305 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 RHOT2Q8IXI1 618 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 MMGT1Q8N4V1 131 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 PPP1R13LQ8WUF5 828 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 NLRP7Q8WX94 980 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 HES6Q96HZ4 224 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 TRIP12Q14669 1992 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-225ENST00000494465 TSPAN1O60635 241 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 MCF2P10911 925 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 TBXAS1P24557 533 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-225ENST00000494465 VSNL1P62760 191 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 HIC1Q14526 733 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 BRD3Q15059 726 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 CLEC16AQ2KHT3 1053 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 CFAP221Q4G0U5 840 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 SOCS4Q8WXH5 440 aa17.73■□□□□ 0.43
ATG4B-225ENST00000494465 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-225ENST00000494465 SEC31AO94979 1220 aaKnown RBP17.72■□□□□ 0.43
ATG4B-225ENST00000494465 STAG3L1P0CL83 205 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 UNGP13051 313 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-225ENST00000494465 PAFAH1B1P43034 410 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 TFAMQ00059 246 aaKnown RBP17.72■□□□□ 0.43
ATG4B-225ENST00000494465 CCDC181Q5TID7 509 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 ZNF410Q86VK4 478 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 CCDC102AQ96A19 550 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 XYLT2Q9H1B5 865 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 ADAMTS10Q9H324 1103 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 RPF1Q9H9Y2 349 aaKnown RBP17.72■□□□□ 0.43
ATG4B-225ENST00000494465 MBLAC1A4D2B0 266 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-225ENST00000494465 HAS3O00219 553 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 KCNK3O14649 394 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 TNPO2O14787 897 aaKnown RBP17.72■□□□□ 0.43
ATG4B-225ENST00000494465 MTA2O94776 668 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 TM4SF4P48230 202 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 ADAM17P78536 824 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 SREBF2Q12772 1141 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 ACAD10Q6JQN1 1059 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 WDR93Q6P2C0 686 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 TMCO3Q6UWJ1 677 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 ZNF677Q86XU0 584 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 CCDC94Q9BW85 323 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-225ENST00000494465 CHORDC1Q9UHD1 332 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-225ENST00000494465 PCDHB4Q9Y5E5 795 aa17.72■□□□□ 0.43
ATG4B-225ENST00000494465 NRCAMQ92823 1304 aa17.71■□□□□ 0.43
ATG4B-225ENST00000494465 CITO14578 2027 aa17.71■□□□□ 0.43
ATG4B-225ENST00000494465 ATMINO43313 823 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-225ENST00000494465 IL18RAPO95256 599 aa17.71■□□□□ 0.43
ATG4B-225ENST00000494465 CYP1A2P05177 515 aa17.71■□□□□ 0.43
ATG4B-225ENST00000494465 ZNF132P52740 706 aa17.71■□□□□ 0.43
ATG4B-225ENST00000494465 BPIFB4P59827 614 aa17.71■□□□□ 0.43
ATG4B-225ENST00000494465 TMEM270Q6UE05 265 aa17.71■□□□□ 0.43
ATG4B-225ENST00000494465 RBM12Q9NTZ6 932 aaKnown RBP17.71■□□□□ 0.43
ATG4B-225ENST00000494465 A0A1B0GUA9 196 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 TARSL2A2RTX5 802 aaKnown RBP17.71■□□□□ 0.42
ATG4B-225ENST00000494465 LACTBL1A8MY62 500 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 GPR32O75388 356 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 MFSD10Q14728 455 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 KIZQ2M2Z5 673 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 SGSM1Q2NKQ1 1148 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 HNRNPLLQ8WVV9 542 aaKnown RBP17.71■□□□□ 0.42
ATG4B-225ENST00000494465 TAF4BQ92750 862 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 PBKQ96KB5 322 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 IMPG2Q9BZV3 1241 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 CTTNBP2NLQ9P2B4 639 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 Q9Y3F1 56 aa17.71■□□□□ 0.42
ATG4B-225ENST00000494465 CFHP08603 1231 aa17.7■□□□□ 0.42
ATG4B-225ENST00000494465 NFICP08651 508 aa17.7■□□□□ 0.42
ATG4B-225ENST00000494465 TMEM191BP0C7N4 346 aa17.7■□□□□ 0.42
ATG4B-225ENST00000494465 POU5F1Q01860 360 aaKnown RBP17.7■□□□□ 0.42
ATG4B-225ENST00000494465 RBBP8NLQ8NC74 664 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-225ENST00000494465 FAM53CQ9NYF3 392 aa17.7■□□□□ 0.42
ATG4B-225ENST00000494465 SIX4Q9UIU6 781 aa17.7■□□□□ 0.42
ATG4B-225ENST00000494465 GTF3C4Q9UKN8 822 aa17.7■□□□□ 0.42
ATG4B-225ENST00000494465 AMFRQ9UKV5 643 aa17.7■□□□□ 0.42
ATG4B-225ENST00000494465 TRIP11Q15643 1979 aa17.7■□□□□ 0.42
ATG4B-225ENST00000494465 DDX3YO15523 660 aaKnown RBP17.69■□□□□ 0.42
ATG4B-225ENST00000494465 CA12O43570 354 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 CYP1A1P04798 512 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-225ENST00000494465 TUBBP07437 444 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 FGFR4P22455 802 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 BEX3Q00994 111 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 SLC10A6Q3KNW5 377 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 C11orf63Q6NUN7 778 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 RUFY4Q6ZNE9 571 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 TMEM130Q8N3G9 435 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 TRPV1Q8NER1 839 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 CXorf38Q8TB03 319 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 ANKRD36BP1Q96IX9 119 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 CALR3Q96L12 384 aaKnown RBP17.69■□□□□ 0.42
ATG4B-225ENST00000494465 SCLT1Q96NL6 688 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 NIF3L1Q9GZT8 377 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 FAM49AQ9H0Q0 323 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-225ENST00000494465 CDHR5Q9HBB8 845 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 SMIM35A0A1B0GVV1 85 aa17.69■□□□□ 0.42
ATG4B-225ENST00000494465 TNNC2P02585 160 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms