RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 CACNA2D4Q7Z3S7 1137 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 ZNF598Q86UK7 904 aaKnown RBP13.65□□□□□ -0.22
VPS52-220ENST00000493674 C1orf127Q8N9H9 656 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 ZNF397Q8NF99 534 aaPredicted RBP13.65□□□□□ -0.22
VPS52-220ENST00000493674 ANKRD36BP1Q96IX9 119 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 PAWRQ96IZ0 340 aaKnown RBP13.65□□□□□ -0.22
VPS52-220ENST00000493674 KREMEN1Q96MU8 473 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 ZMAT2Q96NC0 199 aaKnown RBP13.65□□□□□ -0.22
VPS52-220ENST00000493674 NT5C1BQ96P26 610 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 BAG1Q99933 345 aaPredicted RBP13.65□□□□□ -0.22
VPS52-220ENST00000493674 STK33Q9BYT3 514 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 XYLT2Q9H1B5 865 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 WNT8AQ9H1J5 351 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 NLRC4Q9NPP4 1024 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 AIPL1Q9NZN9 384 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 SIX4Q9UIU6 781 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 DNAJC12Q9UKB3 198 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 PYCARDQ9ULZ3 195 aa13.65□□□□□ -0.22
VPS52-220ENST00000493674 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 A0A0U1RQF3 1178 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 DCDC2CA8MYV0 355 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 F8VZ95 297 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 INPPL1O15357 1258 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 ARHGAP6O43182 974 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 PARNO95453 639 aaKnown RBP13.64□□□□□ -0.23
VPS52-220ENST00000493674 STAU1O95793 577 aaKnown RBP13.64□□□□□ -0.23
VPS52-220ENST00000493674 TNNC2P02585 160 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 CXCL10P02778 98 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 TMEM191BP0C7N4 346 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 SKILP12757 684 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 PRKCIP41743 596 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
VPS52-220ENST00000493674 TFAMQ00059 246 aaKnown RBP13.64□□□□□ -0.23
VPS52-220ENST00000493674 BIRC3Q13489 604 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 LRRC26Q2I0M4 334 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 RRAGAQ7L523 313 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 RTN4RL1Q86UN2 441 aaPredicted RBP13.64□□□□□ -0.23
VPS52-220ENST00000493674 TMTC1Q8IUR5 882 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 UBR7Q8N806 425 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 SHC3Q92529 594 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 FAM212AQ96EL1 285 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 FAXDC2Q96IV6 333 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 FAM81BQ96LP2 452 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
VPS52-220ENST00000493674 VRTNQ9H8Y1 702 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 APOBEC3GQ9HC16 384 aaKnown RBP13.64□□□□□ -0.23
VPS52-220ENST00000493674 RGS18Q9NS28 235 aa13.64□□□□□ -0.23
VPS52-220ENST00000493674 NLRC5Q86WI3 1866 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 C9IYK1 514 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 PTGESO14684 152 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 CST3P01034 146 aaPredicted RBP13.63□□□□□ -0.23
VPS52-220ENST00000493674 ZSCAN20P17040 1043 aaPredicted RBP13.63□□□□□ -0.23
VPS52-220ENST00000493674 AKAP5P24588 427 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 NOP14P78316 857 aaKnown RBP13.63□□□□□ -0.23
VPS52-220ENST00000493674 FAM189BP81408 668 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 DRAP1Q14919 205 aaPredicted RBP13.63□□□□□ -0.23
VPS52-220ENST00000493674 CYP26C1Q6V0L0 522 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 AGMOQ6ZNB7 445 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 ENOSF1Q7L5Y1 443 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 IRF2BP2Q7Z5L9 587 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 ZSCAN30Q86W11 494 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 GSTCDQ8NEC7 633 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 KIAA1524Q8TCG1 905 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 TAF4BQ92750 862 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 TATDN2Q93075 761 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 JAKMIP2Q96AA8 810 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 PPP1R10Q96QC0 940 aaKnown RBP13.63□□□□□ -0.23
VPS52-220ENST00000493674 ADAM2Q99965 735 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 PI4K2AQ9BTU6 479 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 FTHL17Q9BXU8 183 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
VPS52-220ENST00000493674 HIPK3Q9H422 1215 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 KCND1Q9NSA2 647 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 ITGA11Q9UKX5 1188 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 GIT1Q9Y2X7 761 aa13.63□□□□□ -0.23
VPS52-220ENST00000493674 PATJQ8NI35 1801 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 SMIM28A0A1B0GU29 152 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 MEIS3P2A8K0S8 358 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 SKIP12755 728 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 CYP3A5P20815 502 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 SOX5P35711 763 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 MAPK8IP2Q13387 824 aaPredicted RBP13.62□□□□□ -0.23
VPS52-220ENST00000493674 NAB2Q15742 525 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 SGSM1Q2NKQ1 1148 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 SFMBT2Q5VUG0 894 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 RAD9BQ6WBX8 426 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 ECHDC2Q86YB7 292 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 OLIG1Q8TAK6 271 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 APBB2Q92870 758 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 KAT5Q92993 513 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 VWCEQ96DN2 955 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 CHP1Q99653 195 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 SYT11Q9BT88 431 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 UBE2TQ9NPD8 197 aaPredicted RBP13.62□□□□□ -0.23
VPS52-220ENST00000493674 C1orf112Q9NSG2 853 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 DPP3Q9NY33 737 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 ARHGAP20Q9P2F6 1191 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms