RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 KNOP1Q1ED39 458 aaKnown RBP17.24■□□□□ 0.35
PSMB4-205ENST00000493673 PTCRAQ6ISU1 281 aaPredicted RBP17.24■□□□□ 0.35
PSMB4-205ENST00000493673 NELFCDQ8IXH7 590 aa17.24■□□□□ 0.35
PSMB4-205ENST00000493673 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
PSMB4-205ENST00000493673 GLIS3Q8NEA6 775 aa17.24■□□□□ 0.35
PSMB4-205ENST00000493673 GOLGA5Q8TBA6 731 aa17.24■□□□□ 0.35
PSMB4-205ENST00000493673 SCFD1Q8WVM8 642 aa17.24■□□□□ 0.35
PSMB4-205ENST00000493673 RXFP1Q9HBX9 757 aa17.24■□□□□ 0.35
PSMB4-205ENST00000493673 ZNF233A6NK53 670 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 MEFVO15553 781 aaPredicted RBP17.23■□□□□ 0.35
PSMB4-205ENST00000493673 BMP1P13497 986 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 PAX3P23760 479 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 KCNQ1P51787 676 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 JADE1Q6IE81 842 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
PSMB4-205ENST00000493673 NT5DC4Q86YG4 428 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 GPD1LQ8N335 351 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.23■□□□□ 0.35
PSMB4-205ENST00000493673 CACTINQ8WUQ7 758 aaKnown RBP17.23■□□□□ 0.35
PSMB4-205ENST00000493673 SAAL1Q96ER3 474 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 CBWD1Q9BRT8 395 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 FNIP2Q9P278 1114 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 C2CD2Q9Y426 696 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 KIAA1671Q9BY89 1806 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 SPDYE4A6NLX3 237 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 SMC2O95347 1197 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 LRPAP1P30533 357 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 DLX2Q07687 328 aaPredicted RBP17.23■□□□□ 0.35
PSMB4-205ENST00000493673 DPYDQ12882 1025 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 STK4Q13043 487 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 SURF1Q15526 300 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 SPATA1Q5VX52 437 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 CRELD2Q6UXH1 353 aaPredicted RBP17.23■□□□□ 0.35
PSMB4-205ENST00000493673 TIGD1Q96MW7 591 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 DZANK1Q9NVP4 752 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 RBAKQ9NYW8 714 aaPredicted RBP17.23■□□□□ 0.35
PSMB4-205ENST00000493673 CLEC1BQ9P126 229 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 BARX2Q9UMQ3 279 aaPredicted RBP17.23■□□□□ 0.35
PSMB4-205ENST00000493673 HCFC2Q9Y5Z7 792 aa17.23■□□□□ 0.35
PSMB4-205ENST00000493673 GOLGA8IPA6NC78 632 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 GRXCR2A6NFK2 248 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 GOLGA8JA6NMD2 632 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 C1RP00736 705 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 HOXD13P35453 343 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 KCNC3Q14003 757 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 CLUL1Q15846 466 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 BMT2Q1RMZ1 405 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 ANKRD54Q6NXT1 300 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 ENGASEQ8NFI3 743 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 PIK3R5Q8WYR1 880 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 MSLNLQ96KJ4 702 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 B3GALT6Q96L58 329 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 AGPAT3Q9NRZ7 376 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 RMND1Q9NWS8 449 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 HSPBP1Q9NZL4 362 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 TUBGCP4Q9UGJ1 667 aa17.22■□□□□ 0.35
PSMB4-205ENST00000493673 TEX28O15482 410 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 KINO60870 393 aaKnown RBP17.21■□□□□ 0.35
PSMB4-205ENST00000493673 TBX10O75333 385 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 RHOBTB3O94955 611 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 GLP2RO95838 553 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 FGFR3P22607 806 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 MCM4P33991 863 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 SNW1Q13573 536 aaKnown RBP17.21■□□□□ 0.35
PSMB4-205ENST00000493673 KCNB1Q14721 858 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 CES5AQ6NT32 575 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 ANKS3Q6ZW76 656 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 BRSK2Q8IWQ3 736 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 APPL2Q8NEU8 664 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 SLC22A17Q8WUG5 538 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 GTPBP4Q9BZE4 634 aaKnown RBP17.21■□□□□ 0.35
PSMB4-205ENST00000493673 PLXNA4Q9HCM2 1894 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 R3HCC1Q9Y3T6 440 aaKnown RBP17.21■□□□□ 0.35
PSMB4-205ENST00000493673 PRUNE2Q8WUY3 3088 aa17.21■□□□□ 0.35
PSMB4-205ENST00000493673 ARHGEF37A1IGU5 675 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 H7C4K7 107 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 SYN3O14994 580 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 CLIC2O15247 247 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 TGFB1I1O43294 461 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 BRCC3P46736 316 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 CLCN4P51793 760 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 SMAD4Q13485 552 aaKnown RBP17.2■□□□□ 0.34
PSMB4-205ENST00000493673 PSMD5Q16401 504 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 RTP2Q5QGT7 225 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 XXYLT1Q8NBI6 393 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 VN1R2Q8NFZ6 395 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
PSMB4-205ENST00000493673 DPP3Q9NY33 737 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 GLUD1P00367 558 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 NFICP08651 508 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 CYP2J2P51589 502 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 RBM10P98175 930 aaKnown RBP17.2■□□□□ 0.34
PSMB4-205ENST00000493673 TFAMQ00059 246 aaKnown RBP17.2■□□□□ 0.34
PSMB4-205ENST00000493673 PRSS55Q6UWB4 352 aaPredicted RBP17.2■□□□□ 0.34
PSMB4-205ENST00000493673 CD300LGQ6UXG3 332 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 DSTYKQ6XUX3 929 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 PALB2Q86YC2 1186 aa17.2■□□□□ 0.34
PSMB4-205ENST00000493673 ELOA2Q8IYF1 753 aaPredicted RBP17.2■□□□□ 0.34
PSMB4-205ENST00000493673 RDH13Q8NBN7 331 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms