RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 E2F7Q96AV8 911 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 TRMT61BQ9BVS5 477 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 CCDC94Q9BW85 323 aaPredicted RBP12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 GPR88Q9GZN0 384 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 TPCN1Q9ULQ1 816 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 GDAQ9Y2T3 454 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 GPR179Q6PRD1 2367 aa12.09□□□□□ -0.47
SNRNP200-207ENST00000493271 VWA8A3KMH1 1905 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 ARHGEF35A5YM69 484 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 FAM205CA6NFA0 338 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 CTDNEP1O95476 244 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 PSMC3P17980 439 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 RPL9P32969 192 aaKnown RBP12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 GRM5P41594 1212 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 ANAPC15P60006 121 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 SLC5A9Q2M3M2 681 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 XKR4Q5GH76 650 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 TANGO2Q6ICL3 276 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 DIS3L2Q8IYB7 885 aaKnown RBP12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 NETO1Q8TDF5 533 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 SMARCD2Q92925 531 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 ASB16Q96NS5 453 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 CNTNAP3BQ96NU0 1288 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 OXCT2Q9BYC2 517 aaPredicted RBP12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 CNTNAP3Q9BZ76 1288 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 TNFSF13BQ9Y275 285 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 EPG5Q9HCE0 2579 aa12.08□□□□□ -0.48
SNRNP200-207ENST00000493271 SMIM28A0A1B0GU29 152 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 WDR27A2RRH5 827 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 TTLL13PA6NNM8 815 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 BTBD18B2RXH4 712 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 MED24O75448 989 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 RETP07949 1114 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 TDGF1P13385 188 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 FDPSP14324 419 aaKnown RBP12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 CEBPBP17676 345 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 TGM1P22735 817 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 FCARP24071 287 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 GLRA4Q5JXX5 417 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 EEF1DP3Q658K8 133 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 TSSK4Q6SA08 328 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 MAP4K3Q8IVH8 894 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 ZNF687Q8N1G0 1237 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 BSNDQ8WZ55 320 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 DDX1Q92499 740 aaKnown RBP12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 FAM3CQ92520 227 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 DOCK6Q96HP0 2047 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 ZNF512Q96ME7 567 aaPredicted RBP12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 CORO1BQ9BR76 489 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 PLA2G2FQ9BZM2 168 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 TRPV4Q9HBA0 871 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 CYP4F11Q9HBI6 524 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 ZNF334Q9HCZ1 680 aaPredicted RBP12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 INSL5Q9Y5Q6 135 aa12.07□□□□□ -0.48
SNRNP200-207ENST00000493271 CACNA1BQ00975 2339 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 NOTCH4Q99466 2003 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 SHISA7A6NL88 538 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 K7ERI5 159 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 PODXLO00592 558 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 PAPSS2O95340 614 aaPredicted RBP12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 ADRB1P08588 477 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 LIG1P18858 919 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 EPHA5P54756 1037 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 MRPL58Q14197 206 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 LRRC32Q14392 662 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 SAFBQ15424 915 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 FAM78AQ5JUQ0 283 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 ZNF280DQ6N043 979 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 CD300LGQ6UXG3 332 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 ALKAL1Q6UXT8 129 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 C3orf58Q8NDZ4 430 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 APPL2Q8NEU8 664 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 GTF3C6Q969F1 213 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 CXCL16Q9H2A7 254 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 AFF4Q9UHB7 1163 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 KCNG1Q9UIX4 513 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 NDRG2Q9UN36 371 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 NUB1Q9Y5A7 615 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 PIAS3Q9Y6X2 628 aa12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 KMT2BQ9UMN6 2715 aaPredicted RBP12.06□□□□□ -0.48
SNRNP200-207ENST00000493271 SLC30A4O14863 429 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 ZNF263O14978 683 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 OR52Z1P0C646 297 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 MCF2P10911 925 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 KCNE1P15382 129 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 GDI1P31150 447 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 BRCC3P46736 316 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 CXCL12P48061 93 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 PLD1Q13393 1074 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 GRM2Q14416 872 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 ZNF568Q3ZCX4 644 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 NT5DC1Q5TFE4 455 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 MFSD6LQ8IWD5 586 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 SPEM1Q8N4L4 309 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 SUSD3Q96L08 255 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 MRPL4Q9BYD3 311 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 TMEM60Q9H2L4 133 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 TMEM134Q9H6X4 195 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms