RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 DTNBO60941 627 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 MOSPD3O75425 235 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 B3GAT3O94766 335 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 ABLIM3O94929 683 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 SEC24AO95486 1093 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 LRG1P02750 347 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 GCFC2P16383 781 aaKnown RBP12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 GJA1P17302 382 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 PSMC3P17980 439 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 BRCC3P46736 316 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 RARRES1P49788 294 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 SHC2P98077 582 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 EARS2Q5JPH6 523 aaKnown RBP12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 EEF1DP3Q658K8 133 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 IL31Q6EBC2 164 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 GALNT17Q6IS24 598 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 Q6ZS52 159 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 SPEM1Q8N4L4 309 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 ZNF461Q8TAF7 563 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 OXER1Q8TDS5 423 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 PIGOQ8TEQ8 1089 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 RSPRY1Q96DX4 576 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 YTHDC1Q96MU7 727 aaKnown RBP12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 HSD17B14Q9BPX1 270 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 LARP6Q9BRS8 491 aaKnown RBP12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 FZD8Q9H461 694 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 GOLGA2P5Q9HBQ8 144 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 TRPV5Q9NQA5 729 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 ANKEF1Q9NU02 776 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 PRMT7Q9NVM4 692 aaPredicted RBP12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 GDAQ9Y2T3 454 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 ASPMQ8IZT6 3477 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 AKAP13Q12802 2813 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 GREB1Q4ZG55 1949 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 TRIP11Q15643 1979 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 TMEM189-UBE2V1I3L0A0 370 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 ARNTLO00327 626 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 USO1O60763 962 aaKnown RBP12□□□□□ -0.49
SMARCC1-205ENST00000483847 LYPLA2O95372 231 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 HSPA4P34932 840 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 SOX9P48436 509 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 ARPP19P56211 112 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 PTGDRQ13258 359 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 TOB2Q14106 344 aaPredicted RBP12□□□□□ -0.49
SMARCC1-205ENST00000483847 UPP1Q16831 310 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 CDCA2Q69YH5 1023 aaPredicted RBP12□□□□□ -0.49
SMARCC1-205ENST00000483847 SLC8B1Q6J4K2 584 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 PIK3AP1Q6ZUJ8 805 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 ANKS3Q6ZW76 656 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 LONP2Q86WA8 852 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 BSNDQ8WZ55 320 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 DDX1Q92499 740 aaKnown RBP12□□□□□ -0.49
SMARCC1-205ENST00000483847 SMARCD2Q92925 531 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 PRIMPOLQ96LW4 560 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 PPP1R10Q96QC0 940 aaKnown RBP12□□□□□ -0.49
SMARCC1-205ENST00000483847 CYP4F11Q9HBI6 524 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 SDK1Q7Z5N4 2213 aa12□□□□□ -0.49
SMARCC1-205ENST00000483847 SLC38A8A6NNN8 435 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 ZNF263O14978 683 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 N4BP3O15049 544 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 AXIN1O15169 862 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 PRKCBP05771 671 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 LIG1P18858 919 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 CNR2P34972 360 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 RBM25P49756 843 aaKnown RBP11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 LIMK1P53667 647 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 PRPF4BQ13523 1007 aaKnown RBP11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 FAM187BQ17R55 369 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 TMEM132AQ24JP5 1023 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 AASDHQ4L235 1098 aaPredicted RBP11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 TXNDC11Q6PKC3 985 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 PDZD4Q76G19 769 aaPredicted RBP11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 CEP68Q76N32 757 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 TCEAL8Q8IYN2 117 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 CCDC43Q96MW1 224 aaKnown RBP11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 ARRDC1-AS1Q9H2J1 176 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 CEP72Q9P209 647 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 INSL5Q9Y5Q6 135 aa11.99□□□□□ -0.49
SMARCC1-205ENST00000483847 ZNF197O14709 1029 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 CPLX1O14810 134 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 FOXD2O60548 495 aaPredicted RBP11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 CDC45O75419 566 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 MICAL2O94851 1124 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 PAPSS2O95340 614 aaPredicted RBP11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 PROS1P07225 676 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 MYL4P12829 197 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 ATF2P15336 505 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 ELF1P32519 619 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 SOX4Q06945 474 aaPredicted RBP11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 STK3Q13188 491 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 GPIHBP1Q8IV16 184 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 MFSD6LQ8IWD5 586 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 ZBTB8OSQ8IWT0 167 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 SLFN12Q8IYM2 578 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 ZSCAN18Q8TBC5 510 aaPredicted RBP11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 DEPDC1BQ8WUY9 529 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 CCDC113Q9H0I3 377 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 SMOC1Q9H4F8 434 aa11.98□□□□□ -0.49
SMARCC1-205ENST00000483847 TRPV4Q9HBA0 871 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms