RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ZDHHC7Q9NXF8 308 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 MTRRQ9UBK8 725 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 TBX20Q9UMR3 447 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 NUB1Q9Y5A7 615 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 H0YCG3 227 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 TULP1O00294 542 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-212ENST00000482251 TRAPPC3O43617 180 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 STX6O43752 255 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 HOXD11P31277 338 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-212ENST00000482251 TXLNAP40222 546 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 PPP2R3AQ06190 1150 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 FOXD4L6Q3SYB3 417 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-212ENST00000482251 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
CPSF4-212ENST00000482251 SLC39A4Q6P5W5 647 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 PDXDC1Q6P996 788 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 FOXD4L3Q6VB84 417 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-212ENST00000482251 BMP8AQ7Z5Y6 402 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 GPR65Q8IYL9 337 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 UBALD2Q8IYN6 164 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 KRI1Q8N9T8 703 aaKnown RBP11.42□□□□□ -0.58
CPSF4-212ENST00000482251 PRSS33Q8NF86 280 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 HDAC7Q8WUI4 952 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 FIZ1Q96SL8 496 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 MSTO1Q9BUK6 570 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 KCNK12Q9HB15 430 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 HCFC1R1Q9NWW0 138 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 TBC1D7Q9P0N9 293 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 DOCK8Q8NF50 2099 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 DOCK6Q96HP0 2047 aa11.42□□□□□ -0.58
CPSF4-212ENST00000482251 ZDBF2Q9HCK1 2354 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 A0A087X0B3 334 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 CLTAP09496 248 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 FSHRP23945 695 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 ROR1Q01973 937 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 RAB33AQ14088 237 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 ENOX2Q16206 610 aaKnown RBP11.41□□□□□ -0.58
CPSF4-212ENST00000482251 AXDND1Q5T1B0 1012 aaPredicted RBP11.41□□□□□ -0.58
CPSF4-212ENST00000482251 RRAGBQ5VZM2 374 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 ANKS3Q6ZW76 656 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 MAP4K3Q8IVH8 894 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 PDILTQ8N807 584 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 PANK2Q9BZ23 570 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 MFSD1Q9H3U5 465 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 STK17AQ9UEE5 414 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 CCDC39Q9UFE4 941 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 KCNG1Q9UIX4 513 aa11.41□□□□□ -0.58
CPSF4-212ENST00000482251 SRPRBQ9Y5M8 271 aaKnown RBP11.41□□□□□ -0.58
CPSF4-212ENST00000482251 TTC26A0AVF1 554 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 WDR27A2RRH5 827 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 MYMKA6NI61 221 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 LACTBL1A8MY62 500 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 ANKRD63C9JTQ0 380 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 PPEF2O14830 753 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 OGTO15294 1046 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 FAM189A1O60320 539 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 PIGRP01833 764 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 CFHP08603 1231 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 NFICP08651 508 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 RPL9P32969 192 aaKnown RBP11.4□□□□□ -0.58
CPSF4-212ENST00000482251 DDIT3P35638 169 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 STAT6P42226 847 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 ACOT2P49753 483 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 NHLH1Q02575 133 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 TDGQ13569 410 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 STK38Q15208 465 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 CTXN3Q4LDR2 81 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 CYP26C1Q6V0L0 522 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 HSCBQ8IWL3 235 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 FLCNQ8NFG4 579 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 ING5Q8WYH8 240 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 DDX12PQ92771 950 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 RHOBTB2Q9BYZ6 727 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 RPF1Q9H9Y2 349 aaKnown RBP11.4□□□□□ -0.58
CPSF4-212ENST00000482251 FBXL21Q9UKT6 434 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 DUSP12Q9UNI6 340 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 TIMM13Q9Y5L4 95 aaPredicted RBP11.4□□□□□ -0.58
CPSF4-212ENST00000482251 BACE2Q9Y5Z0 518 aa11.4□□□□□ -0.58
CPSF4-212ENST00000482251 A0A0B4J269 797 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 PRRG1O14668 218 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 SYN3O14994 580 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 XYLBO75191 536 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 HSP90AA1P07900 732 aaKnown RBP11.39□□□□□ -0.59
CPSF4-212ENST00000482251 HNRNPA1P09651 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
CPSF4-212ENST00000482251 IDEP14735 1019 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 CPB1P15086 417 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 ANK1P16157 1881 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 AVPR2P30518 371 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 GTF2BQ00403 316 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 KCNA1Q09470 495 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 SLC39A14Q15043 492 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 JADE1Q6IE81 842 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 ZNF280DQ6N043 979 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 SIX5Q8N196 739 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 TMEM105Q8N8V8 129 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 ITFG1Q8TB96 612 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 SUSD3Q96L08 255 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 PHOX2BQ99453 314 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 FGFBP2Q9BYJ0 223 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 ZSCAN16Q9H4T2 348 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms