RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 MCCD1P59942 119 aaPredicted RBP15.49■□□□□ 0.07
CHD3-211ENST00000481999 CLDN10P78369 228 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 GRB14Q14449 540 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 LLGL1Q15334 1064 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 TRADDQ15628 312 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 TMEM132AQ24JP5 1023 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 ADAT2Q7Z6V5 191 aaKnown RBP15.49■□□□□ 0.07
CHD3-211ENST00000481999 NT5DC3Q86UY8 548 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 WHAMMQ8TF30 809 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 LMBR1Q8WVP7 490 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 IFT81Q8WYA0 676 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.49■□□□□ 0.07
CHD3-211ENST00000481999 RFFLQ8WZ73 363 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 MRPL4Q9BYD3 311 aaKnown RBP15.49■□□□□ 0.07
CHD3-211ENST00000481999 C1orf112Q9NSG2 853 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 RSPH14Q9UHP6 348 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 INTUQ9ULD6 942 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 HBP1O60381 514 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 TMEM253P0C7T8 217 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 ZBTB48P10074 688 aaPredicted RBP15.48■□□□□ 0.07
CHD3-211ENST00000481999 ZNF394Q53GI3 561 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 DCAF12L1Q5VU92 463 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 DAB2IPQ5VWQ8 1189 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 ACTRT1Q8TDG2 376 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 TRIM7Q9C029 511 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 FEZ2Q9UHY8 353 aaPredicted RBP15.48■□□□□ 0.07
CHD3-211ENST00000481999 LCMT1Q9UIC8 334 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 AKT3Q9Y243 479 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 A0A0A6YYK5 440 aaPredicted RBP15.48■□□□□ 0.07
CHD3-211ENST00000481999 A6NNZ2 444 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 CEP104O60308 925 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 GH1P01241 217 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 MBTD1Q05BQ5 628 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 GRM1Q13255 1194 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 ZNF211Q13398 564 aaPredicted RBP15.48■□□□□ 0.07
CHD3-211ENST00000481999 MXD4Q14582 209 aaPredicted RBP15.48■□□□□ 0.07
CHD3-211ENST00000481999 TUBB8Q3ZCM7 444 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 ZNF568Q3ZCX4 644 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 CFAP58Q5T655 872 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 NAA35Q5VZE5 725 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 SLFN12LQ6IEE8 588 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 EIF1ADQ8N9N8 165 aaKnown RBP15.48■□□□□ 0.07
CHD3-211ENST00000481999 CPA5Q8WXQ8 436 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 PARK7Q99497 189 aaKnown RBP15.48■□□□□ 0.07
CHD3-211ENST00000481999 TINF2Q9BSI4 451 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 CAPS2Q9BXY5 557 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 RNF19AQ9NV58 838 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 CTTNBP2NLQ9P2B4 639 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 PASKQ96RG2 1323 aa15.48■□□□□ 0.07
CHD3-211ENST00000481999 H3BRB1 525 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 MEFVO15553 781 aaPredicted RBP15.47■□□□□ 0.07
CHD3-211ENST00000481999 CCDC172P0C7W6 258 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 CXCL8P10145 99 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 GCLCP48506 637 aaPredicted RBP15.47■□□□□ 0.07
CHD3-211ENST00000481999 PDE6CP51160 858 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 IRAK1P51617 712 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 ZNF157P51786 506 aaPredicted RBP15.47■□□□□ 0.07
CHD3-211ENST00000481999 TFAMQ00059 246 aaKnown RBP15.47■□□□□ 0.07
CHD3-211ENST00000481999 LAMC2Q13753 1193 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 FAM110CQ1W6H9 321 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 TMEM270Q6UE05 265 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 EFCAB13Q8IY85 973 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 IQCKQ8N0W5 287 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 PPTC7Q8NI37 304 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 CASKIN2Q8WXE0 1202 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 CALR3Q96L12 384 aaKnown RBP15.47■□□□□ 0.07
CHD3-211ENST00000481999 ZIM3Q96PE6 472 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 TUT1Q9H6E5 874 aaKnown RBP15.47■□□□□ 0.07
CHD3-211ENST00000481999 NR2E1Q9Y466 385 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 ANKRD62A6NC57 917 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 ITGA4P13612 1032 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 CD58P19256 250 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 GTF2H1P32780 548 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 MYL6P60660 151 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 NOP14P78316 857 aaKnown RBP15.47■□□□□ 0.07
CHD3-211ENST00000481999 ACVR2BQ13705 512 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 NCOA4Q13772 614 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 ATF7IP2Q5U623 682 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 SCARA5Q6ZMJ2 495 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 PLEKHH3Q7Z736 793 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 USP37Q86T82 979 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 ZBTB8OSQ8IWT0 167 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 KLHL7Q8IXQ5 586 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 ZIC5Q96T25 663 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 ISCUQ9H1K1 167 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 CXCL16Q9H2A7 254 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 LAMA3Q16787 3333 aa15.47■□□□□ 0.07
CHD3-211ENST00000481999 GPR25O00155 361 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 RAD51CO43502 376 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 STRNO43815 780 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 FAM153BP0C7A2 387 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 FAM153CQ494X1 144 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 TTMPQ5BVD1 217 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 ZPBP2Q6X784 338 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 SLFN11Q7Z7L1 901 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 SYCE1Q8N0S2 351 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 TCP11Q8WWU5 503 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 ALG3Q92685 438 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 KRT35Q92764 455 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 ARL8AQ96BM9 186 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms