RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 PSMD6Q15008 389 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 NAB2Q15742 525 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 NFIL3Q16649 462 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 TPD52L1Q16890 204 aaPredicted RBP12.32□□□□□ -0.44
SRRT-211ENST00000478693 ZCWPW2Q504Y3 356 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 KIAA1841Q6NSI8 718 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 FUT10Q6P4F1 479 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 TMC7Q7Z402 723 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 USP37Q86T82 979 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 NT5DC4Q86YG4 428 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 EFCAB13Q8IY85 973 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 FAM186BQ8IYM0 893 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 VPS52Q8N1B4 723 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 MLKLQ8NB16 471 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 SPPL3Q8TCT6 385 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 PPP2R3CQ969Q6 453 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 MRPL38Q96DV4 380 aaKnown RBP12.32□□□□□ -0.44
SRRT-211ENST00000478693 FBXL18Q96ME1 805 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 CGRRF1Q99675 332 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 HERC2P3Q9BVR0 1158 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 MTMR12Q9C0I1 747 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.31□□□□□ -0.44
SRRT-211ENST00000478693 TRAPPC3O43617 180 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 BMP6P22004 513 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 LRPAP1P30533 357 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 PSMC2P35998 433 aaKnown RBP12.31□□□□□ -0.44
SRRT-211ENST00000478693 CASP4P49662 377 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 PMS1P54277 932 aaKnown RBP12.31□□□□□ -0.44
SRRT-211ENST00000478693 WNT7BP56706 349 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 NLRP12P59046 1061 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 FKBP3Q00688 224 aaKnown RBP12.31□□□□□ -0.44
SRRT-211ENST00000478693 ELAVL2Q12926 359 aaKnown RBP12.31□□□□□ -0.44
SRRT-211ENST00000478693 ADGRE1Q14246 886 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 SMC1AQ14683 1233 aaKnown RBP12.31□□□□□ -0.44
SRRT-211ENST00000478693 SKIV2LQ15477 1246 aaKnown RBP12.31□□□□□ -0.44
SRRT-211ENST00000478693 UPP1Q16831 310 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 CCDC40Q4G0X9 1142 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 SPATA1Q5VX52 437 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 ANKRD40Q6AI12 368 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 CENPPQ6IPU0 288 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 DCLRE1AQ6PJP8 1040 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 DDX53Q86TM3 631 aaKnown RBP12.31□□□□□ -0.44
SRRT-211ENST00000478693 CEP57Q86XR8 500 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 WDR49Q8IV35 697 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 PPM1EQ8WY54 764 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 EEF2KMTQ96G04 330 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 ZNF560Q96MR9 790 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 DMAC2Q9NW81 257 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 DPP3Q9NY33 737 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 TMEM63CQ9P1W3 806 aa12.31□□□□□ -0.44
SRRT-211ENST00000478693 TDRD15B5MCY1 1934 aaKnown RBP12.31□□□□□ -0.44
SRRT-211ENST00000478693 PPP1R3GB7ZBB8 358 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 C2CD2LO14523 706 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 PHACTR2O75167 634 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 AKAP3O75969 853 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 SOD2P04179 222 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 ITGB3P05106 788 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 DNAJB1P25685 340 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 POLR2BP30876 1174 aaKnown RBP12.3□□□□□ -0.44
SRRT-211ENST00000478693 IRS1P35568 1242 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 BRCC3P46736 316 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 GLUD2P49448 558 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 BIRC3Q13489 604 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 CCDC85BQ15834 202 aaPredicted RBP12.3□□□□□ -0.44
SRRT-211ENST00000478693 KLHL40Q2TBA0 621 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 DPCR1Q3MIW9 517 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 DCAF17Q5H9S7 520 aaPredicted RBP12.3□□□□□ -0.44
SRRT-211ENST00000478693 TCERG1LQ5VWI1 586 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 PDE12Q6L8Q7 609 aaKnown RBP12.3□□□□□ -0.44
SRRT-211ENST00000478693 DSTYKQ6XUX3 929 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 INTS8Q75QN2 995 aaKnown RBP12.3□□□□□ -0.44
SRRT-211ENST00000478693 TMEM130Q8N3G9 435 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 CSGALNACT2Q8N6G5 542 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 ZBP1Q9H171 429 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 NSUN3Q9H649 340 aaKnown RBP12.3□□□□□ -0.44
SRRT-211ENST00000478693 MMRN2Q9H8L6 949 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 NGRNQ9NPE2 291 aaKnown RBP12.3□□□□□ -0.44
SRRT-211ENST00000478693 INTS13Q9NVM9 706 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 ITGA11Q9UKX5 1188 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 MTCH2Q9Y6C9 303 aa12.3□□□□□ -0.44
SRRT-211ENST00000478693 I3L4J1 428 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 SLC16A3O15427 465 aaKnown RBP12.29□□□□□ -0.44
SRRT-211ENST00000478693 FGFR1OPO95684 399 aaKnown RBP12.29□□□□□ -0.44
SRRT-211ENST00000478693 TAF6P49848 677 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 VAMP7P51809 220 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 BFSP1Q12934 665 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 TRPC3Q13507 836 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 ZBTB6Q15916 424 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 STX1AQ16623 288 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 DUOXA2Q1HG44 320 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 SKOR2Q2VWA4 1001 aaPredicted RBP12.29□□□□□ -0.44
SRRT-211ENST00000478693 USP41Q3LFD5 358 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 FAM171A1Q5VUB5 890 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 C9orf57Q5W0N0 161 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 EP400NLQ6ZTU2 488 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 CREBRFQ8IUR6 639 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 C1orf127Q8N9H9 656 aa12.29□□□□□ -0.44
SRRT-211ENST00000478693 C3orf58Q8NDZ4 430 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms