RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 UPP1Q16831 310 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 LMBRD2Q68DH5 695 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-215ENST00000478531 KIAA1841Q6NSI8 718 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 LLGL2Q6P1M3 1020 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 CLEC17AQ6ZS10 378 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 TAS1R1Q7RTX1 841 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 CEP57Q86XR8 500 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 CBWD2Q8IUF1 395 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 BRSK2Q8IWQ3 736 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 UROC1Q96N76 676 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 GSDMAQ96QA5 445 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 GPR62Q9BZJ7 368 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 TLE6Q9H808 572 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 CLDND1Q9NY35 253 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 UBQLN1Q9UMX0 589 aaKnown RBP7.48□□□□□ -1.21
BRCA1-215ENST00000478531 C2orf71A6NGG8 1288 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 XPOTO43592 962 aaKnown RBP7.48□□□□□ -1.21
BRCA1-215ENST00000478531 EXOC3O60645 756 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 KIF20AO95235 890 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 CXCL14O95715 111 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 DLATP10515 647 aaKnown RBP7.48□□□□□ -1.21
BRCA1-215ENST00000478531 CTSAP10619 480 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 MCM4P33991 863 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 GLUD2P49448 558 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 TFAMQ00059 246 aaKnown RBP7.48□□□□□ -1.21
BRCA1-215ENST00000478531 HYAL1Q12794 435 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 PTPN14Q15678 1187 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 SNRNP35Q16560 246 aaKnown RBP7.48□□□□□ -1.21
BRCA1-215ENST00000478531 FAM171A1Q5VUB5 890 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 GLYCTKQ8IVS8 523 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 CD302Q8IX05 232 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 EFCAB13Q8IY85 973 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 XXYLT1Q8NBI6 393 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 BEST2Q8NFU1 509 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 GOLGA5Q8TBA6 731 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 HERC2P3Q9BVR0 1158 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 KCTD10Q9H3F6 313 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 PDE11AQ9HCR9 933 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 NGRNQ9NPE2 291 aaKnown RBP7.48□□□□□ -1.21
BRCA1-215ENST00000478531 MRPL17Q9NRX2 175 aaKnown RBP7.48□□□□□ -1.21
BRCA1-215ENST00000478531 LMBRD1Q9NUN5 540 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 NUB1Q9Y5A7 615 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 TCF20Q9UGU0 1960 aaKnown RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 ZNF233A6NK53 670 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 PPEF2O14830 753 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 KIAA0391O15091 583 aaKnown RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 LINC01565O15544 149 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 CALUO43852 315 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 NR3C1P04150 777 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 ADRB2P07550 413 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 KCNA5P22460 613 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 BRCC3P46736 316 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 RBM10P98175 930 aaKnown RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 TFF2Q03403 129 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 CLUL1Q15846 466 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 USP41Q3LFD5 358 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 RTP2Q5QGT7 225 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 ZNF658Q5TYW1 1059 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 CEP135Q66GS9 1140 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 PDE12Q6L8Q7 609 aaKnown RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 DCLRE1AQ6PJP8 1040 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 GUF1Q8N442 669 aaKnown RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 SPATA20Q8TB22 786 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 RIN2Q8WYP3 895 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 CCDC127Q96BQ5 260 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 DDX27Q96GQ7 796 aaKnown RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 MTMR12Q9C0I1 747 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 ASB7Q9H672 318 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 CGNQ9P2M7 1197 aaKnown RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 STK39Q9UEW8 545 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 MAN1B1Q9UKM7 699 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 C2CD2Q9Y426 696 aa7.47□□□□□ -1.21
BRCA1-215ENST00000478531 MTCL1Q9Y4B5 1905 aaKnown RBP7.47□□□□□ -1.21
BRCA1-215ENST00000478531 H3BQ06 376 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-215ENST00000478531 PDXKO00764 312 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 CLSTN1O94985 981 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 KRT19P08727 400 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 TMEM191BP0C7N4 346 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 RPL17P18621 184 aaKnown RBP7.46□□□□□ -1.21
BRCA1-215ENST00000478531 NR2F2P24468 414 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 TKTP29401 623 aaKnown RBP7.46□□□□□ -1.21
BRCA1-215ENST00000478531 RPL9P32969 192 aaKnown RBP7.46□□□□□ -1.21
BRCA1-215ENST00000478531 PRCPP42785 496 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 NDUFV1P49821 464 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 SNRPFP62306 86 aaKnown RBP7.46□□□□□ -1.21
BRCA1-215ENST00000478531 CYP24A1Q07973 514 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 ELAVL2Q12926 359 aaKnown RBP7.46□□□□□ -1.21
BRCA1-215ENST00000478531 STIM1Q13586 685 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 SPATA1Q5VX52 437 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 KLHL10Q6JEL2 608 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 PRSS55Q6UWB4 352 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-215ENST00000478531 ELOA2Q8IYF1 753 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-215ENST00000478531 MRPL43Q8N983 215 aaKnown RBP7.46□□□□□ -1.21
BRCA1-215ENST00000478531 HLA-CQ95604 372 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 EEF2KMTQ96G04 330 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 FNBP1Q96RU3 617 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 TTPALQ9BTX7 342 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 CLSTN2Q9H4D0 955 aa7.46□□□□□ -1.21
BRCA1-215ENST00000478531 UBE2ZQ9H832 354 aaPredicted RBP7.46□□□□□ -1.21
BRCA1-215ENST00000478531 KIAA1586Q9HCI6 787 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms