RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 IL17RDQ8NFM7 739 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 IL17DQ8TAD2 202 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 SH3RF3Q8TEJ3 882 aaPredicted RBP5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 FAM167AQ96KS9 214 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 CGRRF1Q99675 332 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 ACO2Q99798 780 aaKnown RBP5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 PACSIN1Q9BY11 444 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 GSTO2Q9H4Y5 243 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 LMBRD1Q9NUN5 540 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 GNL3LQ9NVN8 582 aaKnown RBP5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 FBXO34Q9NWN3 711 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 ABCF2Q9UG63 623 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 FEZ2Q9UHY8 353 aaPredicted RBP5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 SORCS3Q9UPU3 1222 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 NR2E3Q9Y5X4 410 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 DIRC3C9JPN6 131 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 C1QTNF3-AMACRE9PGA6 284 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 F2RL2O00254 374 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 LEFTY2O00292 366 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 SCAF4O95104 1147 aaKnown RBP5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 ITGB1P05556 798 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 SBK3P0C264 359 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 TOB2Q14106 344 aaPredicted RBP5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 FLYWCH1Q4VC44 716 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 RNF207Q6ZRF8 634 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 C14orf80Q86SX3 495 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 FITM2Q8N6M3 262 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 ZBTB34Q8NCN2 500 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 TTC8Q8TAM2 541 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 CPT1CQ8TCG5 803 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 RUNDC1Q96C34 613 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 MTFMTQ96DP5 389 aaKnown RBP5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 CHMP4AQ9BY43 222 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 WDCPQ9H6R7 721 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 ZNF703Q9H7S9 590 aaPredicted RBP5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 C1orf112Q9NSG2 853 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 SIDT1Q9NXL6 827 aaKnown RBP5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 STXBP5LQ9Y2K9 1186 aa5.02□□□□□ -1.61
SMARCA1-204ENST00000478420 GRXCR1A8MXD5 290 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 VSTM5A8MXK1 200 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 NT5C1B-RDH14C9J2C7 533 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 H3BUI4 141 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 PLSCR1O15162 318 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 MARCH6O60337 910 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 UBXN7O94888 489 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 SLC6A2P23975 617 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 RNASE9P60153 205 aaKnown RBP5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 FAM102AQ5T9C2 384 aaPredicted RBP5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 SH2D3CQ8N5H7 860 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 AOPEPQ8N6M6 819 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 KLHDC4Q8TBB5 520 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 PLEKHG4BQ96PX9 1271 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 PNPOQ9NVS9 261 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 TRPM5Q9NZQ8 1165 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 JKAMPQ9P055 326 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 CEP72Q9P209 647 aa5.01□□□□□ -1.61
SMARCA1-204ENST00000478420 CDHR4A6H8M9 788 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 B3GALT2O43825 422 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 FAM20BO75063 409 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 SLC43A1O75387 559 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 GNAI3P08754 354 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 SPATA31D3P0C874 917 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 MYBP10242 640 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 TYRP14679 529 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 HTR1BP28222 390 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 PRDX5P30044 214 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 SLC6A4P31645 630 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 BUD31P41223 144 aaPredicted RBP5□□□□□ -1.61
SMARCA1-204ENST00000478420 GNAI1P63096 354 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 CCDC93Q567U6 631 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 UTP14CQ5TAP6 766 aaKnown RBP5□□□□□ -1.61
SMARCA1-204ENST00000478420 AGAP9Q5VTM2 703 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 TSHZ3Q63HK5 1081 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 SPATA31D4Q6ZUB0 917 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 GDF7Q7Z4P5 450 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 SPRED1Q7Z699 444 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 DAAM2Q86T65 1068 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 RHOT2Q8IXI1 618 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 PPP1R35Q8TAP8 253 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 TBC1D15Q8TC07 691 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 SLC35A4Q96G79 324 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 CCDC136Q96JN2 1154 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 PRDM11Q9NQV5 511 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 GABBR1Q9UBS5 961 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 ATP11BQ9Y2G3 1177 aa5□□□□□ -1.61
SMARCA1-204ENST00000478420 USP15Q9Y4E8 981 aaPredicted RBP5□□□□□ -1.61
SMARCA1-204ENST00000478420 AHRRA9YTQ3 701 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 AGFG2O95081 481 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 CKBP12277 381 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 GCSHP23434 173 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 PIK3CGP48736 1102 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 NKX6-1P78426 367 aaPredicted RBP4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 PLS1Q14651 629 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 HSP90AB2PQ58FF8 381 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 METRNLQ641Q3 311 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 ZNF365Q70YC5 407 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 OVCH2Q7RTZ1 564 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 FAM90A1Q86YD7 464 aa4.99□□□□□ -1.61
SMARCA1-204ENST00000478420 ZFPM1Q8IX07 1006 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms