RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CUL2Q13617 745 aa17.79■□□□□ 0.44
TVP23B-202ENST00000476139 TMC3Q7Z5M5 1100 aa17.79■□□□□ 0.44
TVP23B-202ENST00000476139 FBXO16Q8IX29 292 aaPredicted RBP17.79■□□□□ 0.44
TVP23B-202ENST00000476139 ATP6V1G3Q96LB4 118 aa17.79■□□□□ 0.44
TVP23B-202ENST00000476139 GPR20Q99678 358 aa17.79■□□□□ 0.44
TVP23B-202ENST00000476139 PTPN22Q9Y2R2 807 aa17.79■□□□□ 0.44
TVP23B-202ENST00000476139 PCDHB4Q9Y5E5 795 aa17.79■□□□□ 0.44
TVP23B-202ENST00000476139 FAM169AQ9Y6X4 670 aa17.79■□□□□ 0.44
TVP23B-202ENST00000476139 PTPRFP10586 1907 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 MROH7Q68CQ1 1323 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 ZBTB42B2RXF5 422 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 MSCO60682 206 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 MAPK4P31152 587 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 ABCD1P33897 745 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 FAM160B1Q5W0V3 765 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 CDR2LQ86X02 465 aaPredicted RBP17.78■□□□□ 0.44
TVP23B-202ENST00000476139 ERO1BQ86YB8 467 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 RNF149Q8NC42 400 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 ZNFX1Q9P2E3 1918 aaKnown RBP17.78■□□□□ 0.44
TVP23B-202ENST00000476139 RARAP10276 462 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 PLTPP55058 493 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 ENPEPQ07075 957 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 SEL1L2Q5TEA6 688 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 CCDC137Q6PK04 289 aaKnown RBP17.78■□□□□ 0.44
TVP23B-202ENST00000476139 CD302Q8IX05 232 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 TMEM134Q9H6X4 195 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 PPANQ9NQ55 473 aaKnown RBP17.78■□□□□ 0.44
TVP23B-202ENST00000476139 ATP8A1Q9Y2Q0 1164 aa17.78■□□□□ 0.44
TVP23B-202ENST00000476139 LDHAP00338 332 aaKnown RBP17.77■□□□□ 0.44
TVP23B-202ENST00000476139 CTNNA2P26232 953 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 LSP1P33241 339 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 NF2P35240 595 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 PTGIRP43119 386 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 NOP14P78316 857 aaKnown RBP17.77■□□□□ 0.44
TVP23B-202ENST00000476139 SKOR1P84550 965 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 LAMTOR4Q0VGL1 99 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 SLC13A5Q86YT5 568 aaPredicted RBP17.77■□□□□ 0.44
TVP23B-202ENST00000476139 MICALL1Q8N3F8 863 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 LRRC45Q96CN5 670 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 FHDC1Q9C0D6 1143 aaPredicted RBP17.77■□□□□ 0.44
TVP23B-202ENST00000476139 RAB17Q9H0T7 212 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 PDGFCQ9NRA1 345 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 FAM114A2Q9NRY5 505 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 O00370 1275 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 NOP56O00567 594 aaKnown RBP17.77■□□□□ 0.44
TVP23B-202ENST00000476139 PHF2O75151 1096 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 NCOA4Q13772 614 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 ZDHHC18Q9NUE0 388 aa17.77■□□□□ 0.44
TVP23B-202ENST00000476139 GOLGA6L10A6NI86 522 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 DCDC2CA8MYV0 355 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 KIAA0391O15091 583 aaKnown RBP17.76■□□□□ 0.43
TVP23B-202ENST00000476139 FAM189A1O60320 539 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 TMOD1P28289 359 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 NSFP46459 744 aaKnown RBP17.76■□□□□ 0.43
TVP23B-202ENST00000476139 RWDD2BP57060 319 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 ZNF844Q08AG5 666 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 ODF2Q5BJF6 829 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 RHPN2Q8IUC4 686 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 ANKRD13AQ8IZ07 590 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 FBXO25Q8TCJ0 367 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 FMO2Q99518 471 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 CGRRF1Q99675 332 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 C11orf70Q9BRQ4 267 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 GJB6O95452 261 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 CYP1A1P04798 512 aaPredicted RBP17.76■□□□□ 0.43
TVP23B-202ENST00000476139 GNA15P30679 374 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 MAGEA9P43362 315 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 OSTNP61366 133 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 SIX1Q15475 284 aaPredicted RBP17.76■□□□□ 0.43
TVP23B-202ENST00000476139 ZNF394Q53GI3 561 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 CELF3Q5SZQ8 465 aaKnown RBP17.76■□□□□ 0.43
TVP23B-202ENST00000476139 PACS2Q86VP3 889 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 MORC4Q8TE76 937 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 SPATA33Q96N06 139 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 MTMR12Q9C0I1 747 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 AGTPBP1Q9UPW5 1226 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 CLTAP09496 248 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 MYZAPP0CAP1 466 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 KCNN1Q92952 543 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 OPTNQ96CV9 577 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 CDCA5Q96FF9 252 aa17.76■□□□□ 0.43
TVP23B-202ENST00000476139 CHRNA3P32297 505 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 MOGSQ13724 837 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 DHX34Q14147 1143 aaKnown RBP17.75■□□□□ 0.43
TVP23B-202ENST00000476139 KDM7AQ6ZMT4 941 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 CCDC105Q8IYK2 499 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 TMEM130Q8N3G9 435 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 UHMK1Q8TAS1 419 aaKnown RBP17.75■□□□□ 0.43
TVP23B-202ENST00000476139 C1orf54Q8WWF1 131 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 BBXQ8WY36 941 aaPredicted RBP17.75■□□□□ 0.43
TVP23B-202ENST00000476139 HERPUD2Q9BSE4 406 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 TSPYL1Q9H0U9 437 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 TMBIM4Q9HC24 238 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 SPDYE5A6NIY4 337 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 MYO1FO00160 1098 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 TOM1L1O75674 476 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 RPL21P46778 160 aaKnown RBP17.75■□□□□ 0.43
TVP23B-202ENST00000476139 CENPCQ03188 943 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 SF3A3Q12874 501 aaKnown RBP eCLIP17.75■□□□□ 0.43
TVP23B-202ENST00000476139 PPP2R5EQ16537 467 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms