RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 CETN3O15182 167 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 B3GAT3O94766 335 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 EFEMP2O95967 443 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 NFICP08651 508 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 FOSL2P15408 326 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 CD44P16070 742 aaKnown RBP18.35■□□□□ 0.53
USP39-211ENST00000465282 PSMC2P35998 433 aaKnown RBP18.35■□□□□ 0.53
USP39-211ENST00000465282 CLCNKBP51801 687 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 AP3M2P53677 418 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 ADGRE1Q14246 886 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 DUOXA2Q1HG44 320 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 KLHL40Q2TBA0 621 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 TIGD5Q53EQ6 642 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 TMEM173Q86WV6 379 aaPredicted RBP18.35■□□□□ 0.53
USP39-211ENST00000465282 WDR49Q8IV35 697 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 ZC3H3Q8IXZ2 948 aaKnown RBP18.35■□□□□ 0.53
USP39-211ENST00000465282 MYLIPQ8WY64 445 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 FNBP1Q96RU3 617 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 PDE11AQ9HCR9 933 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 DPP3Q9NY33 737 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 MTCH2Q9Y6C9 303 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 ATG2AQ2TAZ0 1938 aa18.35■□□□□ 0.53
USP39-211ENST00000465282 PODXLO00592 558 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 SOD2P04179 222 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 IGFBP4P22692 258 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 NLRP12P59046 1061 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 SPAG1Q07617 926 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 PAK1Q13153 545 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 CAMK1Q14012 370 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 SKOR2Q2VWA4 1001 aaPredicted RBP18.34■□□□□ 0.53
USP39-211ENST00000465282 CEP135Q66GS9 1140 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 ANKRD40Q6AI12 368 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 INTS8Q75QN2 995 aaKnown RBP18.34■□□□□ 0.53
USP39-211ENST00000465282 EFCAB13Q8IY85 973 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 RNF168Q8IYW5 571 aaPredicted RBP18.34■□□□□ 0.53
USP39-211ENST00000465282 VPS52Q8N1B4 723 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 TMC2Q8TDI7 906 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 PPP2R3CQ969Q6 453 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 ANKRD36BP1Q96IX9 119 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 PAAF1Q9BRP4 392 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 GOLGA2P5Q9HBQ8 144 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 INTS13Q9NVM9 706 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 TUBGCP4Q9UGJ1 667 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 STXBP5LQ9Y2K9 1186 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 IRAK3Q9Y616 596 aa18.34■□□□□ 0.53
USP39-211ENST00000465282 PRRC2BQ5JSZ5 2229 aaKnown RBP18.34■□□□□ 0.53
USP39-211ENST00000465282 ANO9A1A5B4 782 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 FSD2A1L4K1 749 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 KIF4AO95239 1232 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 TNNC2P02585 160 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 CTSAP10619 480 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 DNAJB1P25685 340 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 MCCD1P59942 119 aaPredicted RBP18.33■□□□□ 0.52
USP39-211ENST00000465282 CLDN10P78369 228 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 TFAMQ00059 246 aaKnown RBP18.33■□□□□ 0.52
USP39-211ENST00000465282 USP41Q3LFD5 358 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 KLHL10Q6JEL2 608 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 FUT10Q6P4F1 479 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 TMC7Q7Z402 723 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 PARD3BQ8TEW8 1205 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 BCL7CQ8WUZ0 217 aaPredicted RBP18.33■□□□□ 0.52
USP39-211ENST00000465282 NELFBQ8WX92 580 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 CEP63Q96MT8 703 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 ITGA11Q9UKX5 1188 aa18.33■□□□□ 0.52
USP39-211ENST00000465282 PIRO00625 290 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 IKBKBO14920 756 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 FSCN2O14926 492 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 SLC16A3O15427 465 aaKnown RBP18.32■□□□□ 0.52
USP39-211ENST00000465282 FGFR1OPO95684 399 aaKnown RBP18.32■□□□□ 0.52
USP39-211ENST00000465282 TMEM191BP0C7N4 346 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 EPB41P11171 864 aaKnown RBP18.32■□□□□ 0.52
USP39-211ENST00000465282 KRT13P13646 458 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 TNNI1P19237 187 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 PNPLA4P41247 253 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 CASP4P49662 377 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 ERVFC1P60507 584 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 SMC1AQ14683 1233 aaKnown RBP18.32■□□□□ 0.52
USP39-211ENST00000465282 C9orf57Q5W0N0 161 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 TTI2Q6NXR4 508 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 PDXDC1Q6P996 788 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 FAM186BQ8IYM0 893 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 MICAL1Q8TDZ2 1067 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 CGRRF1Q99675 332 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 TCF25Q9BQ70 676 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 HERC2P3Q9BVR0 1158 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 ZBP1Q9H171 429 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 NSUN3Q9H649 340 aaKnown RBP18.32■□□□□ 0.52
USP39-211ENST00000465282 ENTPD7Q9NQZ7 604 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 CHST7Q9NS84 486 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 RWDD2AQ9UIY3 292 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 NUB1Q9Y5A7 615 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 SCN1AP35498 2009 aa18.32■□□□□ 0.52
USP39-211ENST00000465282 MYO7AQ13402 2215 aa18.31■□□□□ 0.52
USP39-211ENST00000465282 ARHGEF37A1IGU5 675 aa18.31■□□□□ 0.52
USP39-211ENST00000465282 NCK2O43639 380 aa18.31■□□□□ 0.52
USP39-211ENST00000465282 AKAP3O75969 853 aa18.31■□□□□ 0.52
USP39-211ENST00000465282 LETM1O95202 739 aaPredicted RBP18.31■□□□□ 0.52
USP39-211ENST00000465282 DLATP10515 647 aaKnown RBP18.31■□□□□ 0.52
USP39-211ENST00000465282 ERCC5P28715 1186 aaPredicted RBP18.31■□□□□ 0.52
USP39-211ENST00000465282 PMS1P54277 932 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms