RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 TMEM221A6NGB7 291 aa19.27■□□□□ 0.68
SF1-212ENST00000463343 M0R296 226 aa19.27■□□□□ 0.68
SF1-212ENST00000463343 CSPG5O95196 566 aa19.27■□□□□ 0.68
SF1-212ENST00000463343 KCNB1Q14721 858 aa19.27■□□□□ 0.68
SF1-212ENST00000463343 DDX53Q86TM3 631 aaKnown RBP19.27■□□□□ 0.68
SF1-212ENST00000463343 ELOA2Q8IYF1 753 aaPredicted RBP19.27■□□□□ 0.68
SF1-212ENST00000463343 CCDC47Q96A33 483 aaKnown RBP19.27■□□□□ 0.68
SF1-212ENST00000463343 PBXIP1Q96AQ6 731 aa19.27■□□□□ 0.68
SF1-212ENST00000463343 CBWD1Q9BRT8 395 aa19.27■□□□□ 0.68
SF1-212ENST00000463343 COLEC11Q9BWP8 271 aa19.27■□□□□ 0.68
SF1-212ENST00000463343 PCIF1Q9H4Z3 704 aa19.27■□□□□ 0.68
SF1-212ENST00000463343 RPF1Q9H9Y2 349 aaKnown RBP19.27■□□□□ 0.68
SF1-212ENST00000463343 BARX2Q9UMQ3 279 aaPredicted RBP19.27■□□□□ 0.68
SF1-212ENST00000463343 PCDHGC5Q9Y5F6 944 aa19.27■□□□□ 0.68
SF1-212ENST00000463343 UBE4BO95155 1302 aa19.26■□□□□ 0.67
SF1-212ENST00000463343 TRIP11Q15643 1979 aa19.26■□□□□ 0.67
SF1-212ENST00000463343 CASTOR2A6NHX0 329 aa19.26■□□□□ 0.67
SF1-212ENST00000463343 KINO60870 393 aaKnown RBP19.26■□□□□ 0.67
SF1-212ENST00000463343 SRGAP2BP0DMP2 458 aa19.26■□□□□ 0.67
SF1-212ENST00000463343 IGFBP6P24592 240 aaPredicted RBP19.26■□□□□ 0.67
SF1-212ENST00000463343 SOX4Q06945 474 aaPredicted RBP19.26■□□□□ 0.67
SF1-212ENST00000463343 SPAG1Q07617 926 aa19.26■□□□□ 0.67
SF1-212ENST00000463343 ZBTB6Q15916 424 aa19.26■□□□□ 0.67
SF1-212ENST00000463343 KNOP1Q1ED39 458 aaKnown RBP19.26■□□□□ 0.67
SF1-212ENST00000463343 ERCC4Q92889 916 aaPredicted RBP19.26■□□□□ 0.67
SF1-212ENST00000463343 C18orf25Q96B23 403 aaPredicted RBP19.26■□□□□ 0.67
SF1-212ENST00000463343 SAAL1Q96ER3 474 aa19.26■□□□□ 0.67
SF1-212ENST00000463343 NGRNQ9NPE2 291 aaKnown RBP19.26■□□□□ 0.67
SF1-212ENST00000463343 PCDHA5Q9Y5H7 936 aa19.26■□□□□ 0.67
SF1-212ENST00000463343 CACNA1HO95180 2353 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 GOLGA8IPA6NC78 632 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 GOLGA8JA6NMD2 632 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 EFEMP2O95967 443 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 HOXB8P17481 243 aaPredicted RBP19.25■□□□□ 0.67
SF1-212ENST00000463343 POU5F1Q01860 360 aaKnown RBP19.25■□□□□ 0.67
SF1-212ENST00000463343 SIGLEC14Q08ET2 396 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 HSP90AA2PQ14568 343 aaPredicted RBP19.25■□□□□ 0.67
SF1-212ENST00000463343 TAS1R1Q7RTX1 841 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 SPATA20Q8TB22 786 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 FAM212AQ96EL1 285 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 FAM213AQ9BRX8 229 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 S1PR5Q9H228 398 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 GOLGA2P5Q9HBQ8 144 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 SLC38A7Q9NVC3 462 aa19.25■□□□□ 0.67
SF1-212ENST00000463343 TDRD15B5MCY1 1934 aaKnown RBP19.25■□□□□ 0.67
SF1-212ENST00000463343 PER2O15055 1255 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 CLIC2O15247 247 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 EXTL3O43909 919 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 LDHAP00338 332 aaKnown RBP19.24■□□□□ 0.67
SF1-212ENST00000463343 PTPN5P54829 565 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 SNRPFP62306 86 aaKnown RBP19.24■□□□□ 0.67
SF1-212ENST00000463343 PPP2R3AQ06190 1150 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 ARMCX5Q6P1M9 558 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 DCLRE1AQ6PJP8 1040 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 CD300LGQ6UXG3 332 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 TMC7Q7Z402 723 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 SUGP1Q8IWZ8 645 aaKnown RBP19.24■□□□□ 0.67
SF1-212ENST00000463343 CD302Q8IX05 232 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 VPS52Q8N1B4 723 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 TMEM130Q8N3G9 435 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 FBXL6Q8N531 539 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 VN1R2Q8NFZ6 395 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 AGPAT3Q9NRZ7 376 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 LMBRD1Q9NUN5 540 aa19.24■□□□□ 0.67
SF1-212ENST00000463343 HOOK1Q9UJC3 728 aaKnown RBP19.24■□□□□ 0.67
SF1-212ENST00000463343 TADA2AO75478 443 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 SMC2O95347 1197 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 CXCL14O95715 111 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 CLCNKBP51801 687 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 UPP1Q16831 310 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 ANKRD54Q6NXT1 300 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 HS2ST1Q7LGA3 356 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 SMARCE1Q969G3 411 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 KIF12Q96FN5 646 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 GSDMAQ96QA5 445 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 TSPAN18Q96SJ8 248 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 TCF25Q9BQ70 676 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 GPR62Q9BZJ7 368 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 ZBP1Q9H171 429 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 KCTD10Q9H3F6 313 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 ASB7Q9H672 318 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 HSPBP1Q9NZL4 362 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 ADAM28Q9UKQ2 775 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 CITO14578 2027 aa19.23■□□□□ 0.67
SF1-212ENST00000463343 HIDE1A8MVS5 230 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 KIAA0391O15091 583 aaKnown RBP19.22■□□□□ 0.67
SF1-212ENST00000463343 KIF4AO95239 1232 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 NUBP1P53384 320 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 WNT7BP56706 349 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 PLPP4Q5VZY2 271 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 JADE1Q6IE81 842 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 C12orf56Q8IXR9 622 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 RNF168Q8IYW5 571 aaPredicted RBP19.22■□□□□ 0.67
SF1-212ENST00000463343 GPD1LQ8N335 351 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 MRPL43Q8N983 215 aaKnown RBP19.22■□□□□ 0.67
SF1-212ENST00000463343 AUTS2Q8WXX7 1259 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 DDX27Q96GQ7 796 aaKnown RBP19.22■□□□□ 0.67
SF1-212ENST00000463343 RPGRIP1Q96KN7 1286 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 UROC1Q96N76 676 aa19.22■□□□□ 0.67
SF1-212ENST00000463343 GBP4Q96PP9 640 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms