RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 UPP1Q16831 310 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 CT47A1Q5JQC4 288 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 C11orf57Q6ZUT1 292 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 INTS8Q75QN2 995 aaKnown RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 WDR49Q8IV35 697 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 CSGALNACT2Q8N6G5 542 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 PARD3BQ8TEW8 1205 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 GDPD5Q8WTR4 605 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 BCL7CQ8WUZ0 217 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 DDX27Q96GQ7 796 aaKnown RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 TMEM169Q96HH4 297 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 IGSF21Q96ID5 467 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 FAM84AQ96KN4 292 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 CEP63Q96MT8 703 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 FAM161BQ96MY7 647 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 POP1Q99575 1024 aaKnown RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 CGRRF1Q99675 332 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 C11orf84Q9BUA3 381 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 ALG13Q9NP73 1137 aaKnown RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 INTS13Q9NVM9 706 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 MARCH5Q9NX47 278 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 PTPRJQ12913 1337 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-221ENST00000462352 RFXAPO00287 272 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 KIF4AO95239 1232 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 ITGB1P05556 798 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 TMEM191BP0C7N4 346 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 TNNI1P19237 187 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 IGFBP6P24592 240 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-221ENST00000462352 LRPAP1P30533 357 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 RPL9P32969 192 aaKnown RBP12.76□□□□□ -0.37
CPNE1-221ENST00000462352 DLG4P78352 724 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 PLCB3Q01970 1234 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 BFSP1Q12934 665 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 Q7L0L9 218 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 FILIP1Q7Z7B0 1213 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 OR5B17Q8NGF7 314 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 SPPL3Q8TCT6 385 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 CACTINQ8WUQ7 758 aaKnown RBP12.76□□□□□ -0.37
CPNE1-221ENST00000462352 BORCS6Q96GS4 357 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 ANKRD36BP1Q96IX9 119 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 COLEC11Q9BWP8 271 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 SRRTQ9BXP5 876 aaKnown RBP12.76□□□□□ -0.37
CPNE1-221ENST00000462352 MTMR12Q9C0I1 747 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 DNAJC25Q9H1X3 360 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 PRDM12Q9H4Q4 367 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 DPP3Q9NY33 737 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 ADAM28Q9UKQ2 775 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 CHD7Q9P2D1 2997 aa12.76□□□□□ -0.37
CPNE1-221ENST00000462352 SZT2Q5T011 3432 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 TMEM189-UBE2V1I3L0A0 370 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 PPEF2O14830 753 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 GRM6O15303 877 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 TADA2AO75478 443 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 B3GAT3O94766 335 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 TNNC2P02585 160 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 CCDC192P0DO97 292 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 KRT13P13646 458 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 VAMP7P51809 220 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 MCCD1P59942 119 aaPredicted RBP12.75□□□□□ -0.37
CPNE1-221ENST00000462352 CLDN10P78369 228 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 KRT17Q04695 432 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 ENPEPQ07075 957 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 DUOXA2Q1HG44 320 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 C9orf57Q5W0N0 161 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 DCLRE1AQ6PJP8 1040 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 CD300LGQ6UXG3 332 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 USP37Q86T82 979 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 C1orf127Q8N9H9 656 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 C3orf58Q8NDZ4 430 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 HASPINQ8TF76 798 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 ZNF516Q92618 1163 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 FUCA2Q9BTY2 467 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 LZTS1Q9Y250 596 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 CDH23Q9H251 3354 aa12.75□□□□□ -0.37
CPNE1-221ENST00000462352 ANO9A1A5B4 782 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 PIRO00625 290 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 LPXNO60711 386 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 FGFR1OPO95684 399 aaKnown RBP12.74□□□□□ -0.37
CPNE1-221ENST00000462352 EFEMP2O95967 443 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 ITGB3P05106 788 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 DNAJB1P25685 340 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 UBE3AQ05086 875 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 TPD52L1Q16890 204 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-221ENST00000462352 CCDC40Q4G0X9 1142 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 ANO6Q4KMQ2 910 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 C1orf220Q5T0J3 134 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 FUT10Q6P4F1 479 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 FRMD5Q7Z6J6 570 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 DDX53Q86TM3 631 aaKnown RBP12.74□□□□□ -0.37
CPNE1-221ENST00000462352 DEFB123Q8N688 67 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 ENOX1Q8TC92 643 aaKnown RBP12.74□□□□□ -0.37
CPNE1-221ENST00000462352 POF1BQ8WVV4 589 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 VN1R3Q9BXE9 311 aa12.74□□□□□ -0.37
CPNE1-221ENST00000462352 GPR62Q9BZJ7 368 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms