RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 MARCH5Q9NX47 278 aa26.04■■□□□ 1.76
CPSF4-207ENST00000451876 TRIM49P0CI25 452 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 TRIM49CP0CI26 452 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 TNNI1P19237 187 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 VAMP7P51809 220 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 UPP1Q16831 310 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 NT5DC4Q86YG4 428 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 SLC39A11Q8N1S5 342 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 C3orf58Q8NDZ4 430 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 ZNF516Q92618 1163 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 TTYH1Q9H313 450 aaPredicted RBP26.03■■□□□ 1.76
CPSF4-207ENST00000451876 ZNF576Q9H609 170 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 ATG2AQ2TAZ0 1938 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 KIF4AO95239 1232 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 ALDH2P05091 517 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 ITGB1P05556 798 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 CYP3A5P20815 502 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 CLDN10P78369 228 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 IRF2BP1Q8IU81 584 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 BEST2Q8NFU1 509 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 ENOX1Q8TC92 643 aaKnown RBP26.03■■□□□ 1.76
CPSF4-207ENST00000451876 TMC2Q8TDI7 906 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 HASPINQ8TF76 798 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 ARNTL2Q8WYA1 636 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 AAASQ9NRG9 546 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 DPP3Q9NY33 737 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 FAN1Q9Y2M0 1017 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 RWDD3Q9Y3V2 267 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 NFE2L3Q9Y4A8 694 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 PCDHB12Q9Y5F1 795 aa26.03■■□□□ 1.76
CPSF4-207ENST00000451876 MYO9BQ13459 2157 aa26.02■■□□□ 1.76
CPSF4-207ENST00000451876 EPOPA6NHQ4 379 aa26.02■■□□□ 1.76
CPSF4-207ENST00000451876 C5orf67F2Z3F1 127 aa26.02■■□□□ 1.76
CPSF4-207ENST00000451876 PPEF2O14830 753 aa26.02■■□□□ 1.76
CPSF4-207ENST00000451876 XPOTO43592 962 aaKnown RBP26.02■■□□□ 1.76
CPSF4-207ENST00000451876 TMEM191BP0C7N4 346 aa26.02■■□□□ 1.76
CPSF4-207ENST00000451876 LRPAP1P30533 357 aa26.02■■□□□ 1.76
CPSF4-207ENST00000451876 TPD52L1Q16890 204 aaPredicted RBP26.02■■□□□ 1.76
CPSF4-207ENST00000451876 CCDC40Q4G0X9 1142 aa26.02■■□□□ 1.76
CPSF4-207ENST00000451876 HSP90AA4PQ58FG1 418 aa26.02■■□□□ 1.76
CPSF4-207ENST00000451876 C1orf127Q8N9H9 656 aa26.02■■□□□ 1.76
CPSF4-207ENST00000451876 KLHL23Q8NBE8 558 aa26.02■■□□□ 1.76
CPSF4-207ENST00000451876 ARMCX3Q9UH62 379 aaPredicted RBP26.02■■□□□ 1.76
CPSF4-207ENST00000451876 PODXLO00592 558 aa26.01■■□□□ 1.75
CPSF4-207ENST00000451876 KRT13P13646 458 aa26.01■■□□□ 1.75
CPSF4-207ENST00000451876 UROC1Q96N76 676 aa26.01■■□□□ 1.75
CPSF4-207ENST00000451876 SAMD11Q96NU1 681 aa26.01■■□□□ 1.75
CPSF4-207ENST00000451876 SAMSN1Q9NSI8 373 aaKnown RBP26.01■■□□□ 1.75
CPSF4-207ENST00000451876 ITGB3P05106 788 aa26■■□□□ 1.75
CPSF4-207ENST00000451876 MCCD1P59942 119 aaPredicted RBP26■■□□□ 1.75
CPSF4-207ENST00000451876 FRMD5Q7Z6J6 570 aa26■■□□□ 1.75
CPSF4-207ENST00000451876 CXorf38Q8TB03 319 aa26■■□□□ 1.75
CPSF4-207ENST00000451876 IGSF21Q96ID5 467 aa26■■□□□ 1.75
CPSF4-207ENST00000451876 ANKRD36BP1Q96IX9 119 aa26■■□□□ 1.75
CPSF4-207ENST00000451876 CNOT6LQ96LI5 555 aaKnown RBP26■■□□□ 1.75
CPSF4-207ENST00000451876 VWA8A3KMH1 1905 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 FGF18O76093 207 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 FGFR1OPO95684 399 aaKnown RBP25.99■■□□□ 1.75
CPSF4-207ENST00000451876 ZNF165P49910 485 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 MARSP56192 900 aaKnown RBP25.99■■□□□ 1.75
CPSF4-207ENST00000451876 MYL5Q02045 173 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 PPP3CAQ08209 521 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 NCAPHQ15003 741 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 DUOXA2Q1HG44 320 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 DCAF17Q5H9S7 520 aaPredicted RBP25.99■■□□□ 1.75
CPSF4-207ENST00000451876 C9orf57Q5W0N0 161 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 CD300LGQ6UXG3 332 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 AOPEPQ8N6M6 819 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 FBXO22Q8NEZ5 403 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 CACTINQ8WUQ7 758 aaKnown RBP25.99■■□□□ 1.75
CPSF4-207ENST00000451876 PLVAPQ9BX97 442 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 NAT10Q9H0A0 1025 aaKnown RBP25.99■■□□□ 1.75
CPSF4-207ENST00000451876 THAP9Q9H5L6 903 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 SPG21Q9NZD8 308 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 SIX4Q9UIU6 781 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 TMEM265A0A087WTH1 108 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 ANO9A1A5B4 782 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 B3GAT3O94766 335 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 RPL9P32969 192 aaKnown RBP25.99■■□□□ 1.75
CPSF4-207ENST00000451876 PPM1AP35813 382 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 TDRD10Q5VZ19 366 aaKnown RBP25.99■■□□□ 1.75
CPSF4-207ENST00000451876 SLC35C1Q96A29 364 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 DDX27Q96GQ7 796 aaKnown RBP25.99■■□□□ 1.75
CPSF4-207ENST00000451876 BPIFA3Q9BQP9 254 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 VN1R3Q9BXE9 311 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 MMRN2Q9H8L6 949 aa25.99■■□□□ 1.75
CPSF4-207ENST00000451876 METTL14Q9HCE5 456 aaKnown RBP25.99■■□□□ 1.75
CPSF4-207ENST00000451876 ALG13Q9NP73 1137 aaKnown RBP25.99■■□□□ 1.75
CPSF4-207ENST00000451876 GNA14O95837 355 aa25.98■■□□□ 1.75
CPSF4-207ENST00000451876 TNNC2P02585 160 aa25.98■■□□□ 1.75
CPSF4-207ENST00000451876 RB1P06400 928 aa25.98■■□□□ 1.75
CPSF4-207ENST00000451876 POLR2BP30876 1174 aaKnown RBP25.98■■□□□ 1.75
CPSF4-207ENST00000451876 ENPEPQ07075 957 aa25.98■■□□□ 1.75
CPSF4-207ENST00000451876 TCERG1LQ5VWI1 586 aa25.98■■□□□ 1.75
CPSF4-207ENST00000451876 TRAPPC11Q7Z392 1133 aa25.98■■□□□ 1.75
CPSF4-207ENST00000451876 USP37Q86T82 979 aa25.98■■□□□ 1.75
CPSF4-207ENST00000451876 DHX40Q8IX18 779 aaKnown RBP25.98■■□□□ 1.75
CPSF4-207ENST00000451876 GDPD5Q8WTR4 605 aa25.98■■□□□ 1.75
CPSF4-207ENST00000451876 TMEM169Q96HH4 297 aa25.98■■□□□ 1.75
CPSF4-207ENST00000451876 ADAM28Q9UKQ2 775 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms