RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 ARHGAP27Q6ZUM4 889 aa5.88□□□□□ -1.47
PTPRC-209ENST00000442510 IFNL3Q8IZI9 196 aa5.88□□□□□ -1.47
PTPRC-209ENST00000442510 ESX1Q8N693 406 aa5.88□□□□□ -1.47
PTPRC-209ENST00000442510 SERPINB12Q96P63 405 aa5.88□□□□□ -1.47
PTPRC-209ENST00000442510 CDH19Q9H159 772 aa5.88□□□□□ -1.47
PTPRC-209ENST00000442510 THAP1Q9NVV9 213 aa5.88□□□□□ -1.47
PTPRC-209ENST00000442510 UNC13AQ9UPW8 1703 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 FADS2P1A8MWK0 482 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 RTCAO00442 366 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 KRIT1O00522 736 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 SCAMP1O15126 338 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ASAP2O43150 1006 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TLR2O60603 784 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 MZF1P28698 734 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 EPHB1P54762 984 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 GALNT1Q10472 559 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 NAB1Q13506 487 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 DNAL1Q4LDG9 190 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 VWA3BQ502W6 1294 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 RRAGBQ5VZM2 374 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TYW1BQ6NUM6 668 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 BEND4Q6ZU67 534 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 GSTA5Q7RTV2 222 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 NT5DC4Q86YG4 428 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TAB3Q8N5C8 712 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 RIN3Q8TB24 985 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 SH3TC2Q8TF17 1288 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TCF7L2Q9NQB0 619 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 SETD4Q9NVD3 440 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 COX16Q9P0S2 106 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 UBA2Q9UBT2 640 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 A0A087WZG4 1122 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ANO9A1A5B4 782 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 DNM1LO00429 736 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ORC4O43929 436 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ECDO95905 644 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 VCLP18206 1134 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 CRABP2P29373 138 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 CBX5P45973 191 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 AMPD2Q01433 879 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ZMYND11Q15326 602 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 LACTB2Q53H82 288 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ARHGEF16Q5VV41 709 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ARMCX5Q6P1M9 558 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 PLD3Q8IV08 490 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 LRRC71Q8N4P6 559 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 NOA1Q8NC60 698 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 KBTBD7Q8WVZ9 684 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 APOL2Q9BQE5 337 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 SYT15Q9BQS2 421 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ZMYND12Q9H0C1 365 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ANKZF1Q9H8Y5 726 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 RXFP1Q9HBX9 757 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 SRP68Q9UHB9 627 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 SBNO2Q9Y2G9 1366 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 GRID2IPA4D2P6 1211 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 A6NHS1 94 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 NUTM2BA6NNL0 878 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 NUTM2EB1AL46 878 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 I3L521 148 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 IFIT3O14879 490 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 KPNA6O60684 536 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 MFAP3LO75121 409 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TTC4O95801 387 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 PSMC3P17980 439 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TCEA1P23193 301 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 AFMP43652 599 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 SARSP49591 514 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ERFP50548 548 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 KCNJ2P63252 427 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 GSTM4Q03013 218 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TAP1Q03518 808 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 FUT11Q495W5 492 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 METTL2BQ6P1Q9 378 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TMC7Q7Z402 723 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 CYP4X1Q8N118 509 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 CARNMT1Q8N4J0 409 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 CCNYL1Q8N7R7 359 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 NFATC2IPQ8NCF5 419 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TRPC4APQ8TEL6 797 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 PDCD6IPQ8WUM4 868 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TCEAL3Q969E4 200 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 TRIM43Q96BQ3 446 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 PPP1R16BQ96T49 567 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 FMO2Q99518 471 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 CINPQ9BW66 212 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 NMRK1Q9NWW6 199 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 SLC39A1Q9NY26 324 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.87□□□□□ -1.472e-10■■■■□ 19.3
PTPRC-209ENST00000442510 RWDD2AQ9UIY3 292 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 A0A0G2JND7 137 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 H7C2Y5 167 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 WRBO00258 174 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 EXOC3O60645 756 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 GARSP41250 739 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 ATXN1P54253 815 aaKnown RBP5.87□□□□□ -1.47
PTPRC-209ENST00000442510 PCDH1Q08174 1060 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 LSAMPQ13449 338 aa5.87□□□□□ -1.47
PTPRC-209ENST00000442510 RAPSNQ13702 412 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms