RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 LILRB3O75022 631 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 GADD45BO75293 160 aaPredicted RBP17.77■□□□□ 0.44
CTSD-205ENST00000438213 NDUFV1P49821 464 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 UBE2HP62256 183 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 CREMQ03060 361 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 TMEM132DQ14C87 1099 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 FAM171A1Q5VUB5 890 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 JADE1Q6IE81 842 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 PDXDC1Q6P996 788 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 CEP57Q86XR8 500 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 NT5DC4Q86YG4 428 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 ELOA2Q8IYF1 753 aaPredicted RBP17.77■□□□□ 0.44
CTSD-205ENST00000438213 CACTINQ8WUQ7 758 aaKnown RBP17.77■□□□□ 0.44
CTSD-205ENST00000438213 ASB2Q96Q27 587 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 TTPALQ9BTX7 342 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 GTPBP4Q9BZE4 634 aaKnown RBP17.77■□□□□ 0.44
CTSD-205ENST00000438213 TSHZ2Q9NRE2 1034 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.77■□□□□ 0.44
CTSD-205ENST00000438213 AGPAT3Q9NRZ7 376 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 RMND1Q9NWS8 449 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 C2CD2Q9Y426 696 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 NUB1Q9Y5A7 615 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 GOLGA8IPA6NC78 632 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 GOLGA8JA6NMD2 632 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 TGFB1I1O43294 461 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 CLASP2O75122 1294 aaKnown RBP17.76■□□□□ 0.43
CTSD-205ENST00000438213 KLRC2P26717 231 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 LRPAP1P30533 357 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 TFF2Q03403 129 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 PNOCQ13519 176 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 SURF1Q15526 300 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 PUS10Q3MIT2 529 aaKnown RBP17.76■□□□□ 0.43
CTSD-205ENST00000438213 LEXMQ3ZCV2 418 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 SPATA1Q5VX52 437 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 TMEM184AQ6ZMB5 413 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 KIAA0895Q8NCT3 520 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 RIN2Q8WYP3 895 aaPredicted RBP17.76■□□□□ 0.43
CTSD-205ENST00000438213 KLHL5Q96PQ7 755 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 GSDMAQ96QA5 445 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 RXFP1Q9HBX9 757 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 RBAKQ9NYW8 714 aaPredicted RBP17.76■□□□□ 0.43
CTSD-205ENST00000438213 HSPBP1Q9NZL4 362 aa17.76■□□□□ 0.43
CTSD-205ENST00000438213 CLIC2O15247 247 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 LINC01565O15544 149 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 PRPF40AO75400 957 aaKnown RBP17.75■□□□□ 0.43
CTSD-205ENST00000438213 ADH1AP07327 375 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 CNPP09543 421 aaKnown RBP17.75■□□□□ 0.43
CTSD-205ENST00000438213 PAX3P23760 479 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 LTBRP36941 435 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.75■□□□□ 0.43
CTSD-205ENST00000438213 BRSK2Q8IWQ3 736 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 C12orf56Q8IXR9 622 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 XXYLT1Q8NBI6 393 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 CASP10Q92851 521 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 SMARCE1Q969G3 411 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 FNIP2Q9P278 1114 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 TUBGCP4Q9UGJ1 667 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 FAM50BQ9Y247 325 aa17.75■□□□□ 0.43
CTSD-205ENST00000438213 H3BQ06 376 aaPredicted RBP17.74■□□□□ 0.43
CTSD-205ENST00000438213 PDXKO00764 312 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 CYP2J2P51589 502 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 TJAP1Q5JTD0 557 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 LLGL2Q6P1M3 1020 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 ELMSAN1Q6PJG2 1045 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 CD300LGQ6UXG3 332 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 CLEC17AQ6ZS10 378 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 ZSWIM2Q8NEG5 633 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 B3GALT6Q96L58 329 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 DPP3Q9NY33 737 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 CD207Q9UJ71 328 aa17.74■□□□□ 0.43
CTSD-205ENST00000438213 SYN3O14994 580 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 CALUO43852 315 aaPredicted RBP17.73■□□□□ 0.43
CTSD-205ENST00000438213 C1RP00736 705 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 NFICP08651 508 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 HOXB8P17481 243 aaPredicted RBP17.73■□□□□ 0.43
CTSD-205ENST00000438213 FGFR3P22607 806 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 MCM4P33991 863 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 BRCC3P46736 316 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 DLX2Q07687 328 aaPredicted RBP17.73■□□□□ 0.43
CTSD-205ENST00000438213 KCNC3Q14003 757 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 GUF1Q8N442 669 aaKnown RBP17.73■□□□□ 0.43
CTSD-205ENST00000438213 C3orf58Q8NDZ4 430 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 PIK3R5Q8WYR1 880 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 FBXL18Q96ME1 805 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 CLEC1BQ9P126 229 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 DPP7Q9UHL4 492 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 PCDHA5Q9Y5H7 936 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 HCFC2Q9Y5Z7 792 aa17.73■□□□□ 0.43
CTSD-205ENST00000438213 PRUNE2Q8WUY3 3088 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 TEX28O15482 410 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 EXOC3O60645 756 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 TBX10O75333 385 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 GLP2RO95838 553 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 IGFBP6P24592 240 aaPredicted RBP17.72■□□□□ 0.43
CTSD-205ENST00000438213 TFAMQ00059 246 aaKnown RBP17.72■□□□□ 0.43
CTSD-205ENST00000438213 MYBPC2Q14324 1141 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 SNRNP35Q16560 246 aaKnown RBP17.72■□□□□ 0.43
CTSD-205ENST00000438213 RTP2Q5QGT7 225 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 ANKS3Q6ZW76 656 aa17.72■□□□□ 0.43
CTSD-205ENST00000438213 CBWD2Q8IUF1 395 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms