RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 UBXN2BQ14CS0 331 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 CSRP2Q16527 193 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 PABPC1LQ4VXU2 614 aaKnown RBP3.36□□□□□ -1.87
VPS41-206ENST00000418457 ARHGAP29Q52LW3 1261 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 HSP90AB2PQ58FF8 381 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 C1QL3Q5VWW1 255 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 SLC4A10Q6U841 1118 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 UBE3BQ7Z3V4 1068 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 HEATR3Q7Z4Q2 680 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 PRRT2Q7Z6L0 340 aaPredicted RBP3.36□□□□□ -1.87
VPS41-206ENST00000418457 C14orf80Q86SX3 495 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 NLGN4YQ8NFZ3 816 aaPredicted RBP3.36□□□□□ -1.87
VPS41-206ENST00000418457 RUNDC1Q96C34 613 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 CDK5RAP3Q96JB5 506 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 PHACTR3Q96KR7 559 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 FAM167AQ96KS9 214 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 CGRRF1Q99675 332 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 NDC1Q9BTX1 674 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 C1QTNF3Q9BXJ4 246 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 KRTAP3-1Q9BYR8 98 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 C1orf112Q9NSG2 853 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 LMBRD1Q9NUN5 540 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 AURKAIP1Q9NWT8 199 aaPredicted RBP3.36□□□□□ -1.87
VPS41-206ENST00000418457 FAM30AQ9NZY2 134 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 ABCF2Q9UG63 623 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 FEZ2Q9UHY8 353 aaPredicted RBP3.36□□□□□ -1.87
VPS41-206ENST00000418457 STXBP5LQ9Y2K9 1186 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 TSC22D4Q9Y3Q8 395 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 NR2E3Q9Y5X4 410 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 CCNB3Q8WWL7 1395 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 ATAD2BQ9ULI0 1458 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 TIAM1Q13009 1591 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 DRGXA6NNA5 263 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 VSTM5A8MXK1 200 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 B8ZZF3 427 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 UBXN7O94888 489 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 ITGB1P05556 798 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 FTH1P19P0C7X4 201 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 CHN2P52757 468 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 NHLH2Q02577 135 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 CDSNQ15517 529 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 FLYWCH1Q4VC44 716 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 USP39Q53GS9 565 aaKnown RBP3.35□□□□□ -1.87
VPS41-206ENST00000418457 SPDYAQ5MJ70 313 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 MED25Q71SY5 747 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 TMPRSS6Q8IU80 811 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 ZBTB34Q8NCN2 500 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 IL17RDQ8NFM7 739 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 PPP1R35Q8TAP8 253 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 MTFMTQ96DP5 389 aaKnown RBP3.35□□□□□ -1.87
VPS41-206ENST00000418457 CCDC136Q96JN2 1154 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 C8orf48Q96LL4 319 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 FAM193BQ96PV7 902 aaPredicted RBP3.35□□□□□ -1.87
VPS41-206ENST00000418457 DCLRE1CQ96SD1 692 aaKnown RBP3.35□□□□□ -1.87
VPS41-206ENST00000418457 PACSIN1Q9BY11 444 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 REXO4Q9GZR2 422 aaKnown RBP3.35□□□□□ -1.87
VPS41-206ENST00000418457 WDCPQ9H6R7 721 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 PRDM11Q9NQV5 511 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 GNL3LQ9NVN8 582 aaKnown RBP3.35□□□□□ -1.87
VPS41-206ENST00000418457 PNPOQ9NVS9 261 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 FBXO34Q9NWN3 711 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 SIDT1Q9NXL6 827 aaKnown RBP3.35□□□□□ -1.87
VPS41-206ENST00000418457 EIF2B4Q9UI10 523 aaKnown RBP3.35□□□□□ -1.87
VPS41-206ENST00000418457 CFAP43Q8NDM7 1665 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 XDHP47989 1333 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 NCAPD3P42695 1498 aa3.35□□□□□ -1.87
VPS41-206ENST00000418457 HMGXB3Q12766 1538 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 NT5C1B-RDH14C9J2C7 533 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 DIRC3C9JPN6 131 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 H3BUI4 141 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 F2RL2O00254 374 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 LEFTY2O00292 366 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 TRIM24O15164 1050 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 B3GALT2O43825 422 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 TUSC2O75896 110 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 RECQL4O94761 1208 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 HAUS5O94927 633 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 GNAI3P08754 354 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 SBK3P0C264 359 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 MYBP10242 640 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 TYRP14679 529 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 SLC6A2P23975 617 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 HTR1BP28222 390 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 PRDX5P30044 214 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 APOBEC3AP31941 199 aaPredicted RBP3.34□□□□□ -1.87
VPS41-206ENST00000418457 GNAI1P63096 354 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 NRN1LQ496H8 165 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 RABL3Q5HYI8 236 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 OVCH2Q7RTZ1 564 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 DAAM2Q86T65 1068 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 SYT12Q8IV01 421 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 C1orf210Q8IVY1 113 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 SH2D3CQ8N5H7 860 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 FITM2Q8N6M3 262 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 AOPEPQ8N6M6 819 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 KLHDC4Q8TBB5 520 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 SLC35A4Q96G79 324 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 GSTO2Q9H4Y5 243 aa3.34□□□□□ -1.87
VPS41-206ENST00000418457 OBP2AQ9NY56 170 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms