RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CPSF3Q9UKF6 684 aaKnown RBP11.46□□□□□ -0.57
RFC1-203ENST00000418436 PCDHB3Q9Y5E6 796 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 PRUNE2Q8WUY3 3088 aa11.46□□□□□ -0.58
RFC1-203ENST00000418436 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.45□□□□□ -0.58
RFC1-203ENST00000418436 F8W810 466 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 RPN1P04843 607 aaKnown RBP11.45□□□□□ -0.58
RFC1-203ENST00000418436 CXCL8P10145 99 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 GARTP22102 1010 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 FAM160A1Q05DH4 1040 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 STK4Q13043 487 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 HSP90AA2PQ14568 343 aaPredicted RBP11.45□□□□□ -0.58
RFC1-203ENST00000418436 ZBTB6Q15916 424 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 ENOX2Q16206 610 aaKnown RBP11.45□□□□□ -0.58
RFC1-203ENST00000418436 GLRA4Q5JXX5 417 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 CRELD2Q6UXH1 353 aaPredicted RBP11.45□□□□□ -0.58
RFC1-203ENST00000418436 ADGRD2Q7Z7M1 963 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 SYCP3Q8IZU3 236 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 VPS52Q8N1B4 723 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 MRPL43Q8N983 215 aaKnown RBP11.45□□□□□ -0.58
RFC1-203ENST00000418436 SCFD1Q8WVM8 642 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 TIGD1Q96MW7 591 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 IPO9Q96P70 1041 aaKnown RBP11.45□□□□□ -0.58
RFC1-203ENST00000418436 TSPAN18Q96SJ8 248 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 TCF25Q9BQ70 676 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 PRDM6Q9NQX0 595 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 SLC38A7Q9NVC3 462 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 AGO2Q9UKV8 859 aaKnown RBP11.45□□□□□ -0.58
RFC1-203ENST00000418436 PRG3Q9Y2Y8 225 aaPredicted RBP11.45□□□□□ -0.58
RFC1-203ENST00000418436 PCDHGC5Q9Y5F6 944 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 IRAK3Q9Y616 596 aa11.45□□□□□ -0.58
RFC1-203ENST00000418436 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 TMEM189-UBE2V1I3L0A0 370 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 TGFB1I1O43294 461 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 NCK2O43639 380 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 LILRB3O75022 631 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 GADD45BO75293 160 aaPredicted RBP11.44□□□□□ -0.58
RFC1-203ENST00000418436 RHOBTB3O94955 611 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 CTSAP10619 480 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 SOX4Q06945 474 aaPredicted RBP11.44□□□□□ -0.58
RFC1-203ENST00000418436 HYAL1Q12794 435 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 SMC1AQ14683 1233 aaKnown RBP11.44□□□□□ -0.58
RFC1-203ENST00000418436 UPP1Q16831 310 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 CTC1Q2NKJ3 1217 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 CD300LGQ6UXG3 332 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 CLEC17AQ6ZS10 378 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 TMC7Q7Z402 723 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 CD302Q8IX05 232 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 ELOA2Q8IYF1 753 aaPredicted RBP11.44□□□□□ -0.58
RFC1-203ENST00000418436 KIAA0895Q8NCT3 520 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 MICAL1Q8TDZ2 1067 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 POMGNT1Q8WZA1 660 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 UROC1Q96N76 676 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 RPF1Q9H9Y2 349 aaKnown RBP11.44□□□□□ -0.58
RFC1-203ENST00000418436 SLC39A2Q9NP94 309 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 ENTPD7Q9NQZ7 604 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 CACNG4Q9UBN1 327 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 ADAM28Q9UKQ2 775 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 COG5Q9UP83 839 aa11.44□□□□□ -0.58
RFC1-203ENST00000418436 VWA8A3KMH1 1905 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 C2orf71A6NGG8 1288 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 HIDE1A8MVS5 230 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 LACTBL1A8MY62 500 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 KIAA0391O15091 583 aaKnown RBP11.43□□□□□ -0.58
RFC1-203ENST00000418436 CSPG5O95196 566 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 KIF4AO95239 1232 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 CXCL14O95715 111 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 LDHAP00338 332 aaKnown RBP11.43□□□□□ -0.58
RFC1-203ENST00000418436 SOD2P04179 222 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 CYP3A5P20815 502 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 RPL9P32969 192 aaKnown RBP11.43□□□□□ -0.58
RFC1-203ENST00000418436 ACOT2P49753 483 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 CLCNKBP51801 687 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 SNRPFP62306 86 aaKnown RBP11.43□□□□□ -0.58
RFC1-203ENST00000418436 PPP2R3AQ06190 1150 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 ADAM15Q13444 863 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 KCNC3Q14003 757 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 KCNB1Q14721 858 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 PLPP4Q5VZY2 271 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 FUT10Q6P4F1 479 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 DCLRE1AQ6PJP8 1040 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 TAS1R1Q7RTX1 841 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 GPR65Q8IYL9 337 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 ZSWIM2Q8NEG5 633 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 RABGGTAQ92696 567 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 HLA-CQ95604 372 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 PPP2R3CQ969Q6 453 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 C18orf25Q96B23 403 aaPredicted RBP11.43□□□□□ -0.58
RFC1-203ENST00000418436 PABPC5Q96DU9 382 aaKnown RBP11.43□□□□□ -0.58
RFC1-203ENST00000418436 CCDC34Q96HJ3 373 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 PHOX2BQ99453 314 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 CBWD1Q9BRT8 395 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 HERC2P3Q9BVR0 1158 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 GPR62Q9BZJ7 368 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 ASB7Q9H672 318 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 GOLGA2P5Q9HBQ8 144 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 CHST7Q9NS84 486 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 EXOC1Q9NV70 894 aa11.43□□□□□ -0.58
RFC1-203ENST00000418436 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.43□□□□□ -0.58
RFC1-203ENST00000418436 EXTL3O43909 919 aa11.42□□□□□ -0.58
RFC1-203ENST00000418436 TADA2AO75478 443 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms