RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 PTPRHQ9HD43 1115 aa6.3□□□□□ -1.4
RFC4-204ENST00000417876 STK32BQ9NY57 414 aa6.3□□□□□ -1.4
RFC4-204ENST00000417876 PUF60Q9UHX1 559 aaKnown RBP6.3□□□□□ -1.4
RFC4-204ENST00000417876 CORO2BQ9UQ03 480 aa6.3□□□□□ -1.4
RFC4-204ENST00000417876 RRBP1Q9P2E9 1410 aaKnown RBP6.3□□□□□ -1.4
RFC4-204ENST00000417876 PMS2P1A4D2B8 440 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 RHPN2P1A8MT19 583 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 HOXA3O43365 443 aaPredicted RBP6.29□□□□□ -1.4
RFC4-204ENST00000417876 NUAK1O60285 661 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 EIF3JO75822 258 aaKnown RBP6.29□□□□□ -1.4
RFC4-204ENST00000417876 FTH1P19P0C7X4 201 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 SLC7A1P30825 629 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 NPEPPSP55786 919 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 EXOSC9Q06265 439 aaKnown RBP6.29□□□□□ -1.4
RFC4-204ENST00000417876 DUSP8Q13202 625 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 IFIT5Q13325 482 aaKnown RBP6.29□□□□□ -1.4
RFC4-204ENST00000417876 SEM1Q6ZVN7 128 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 SHCBP1Q8NEM2 672 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 IL17RDQ8NFM7 739 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 TNPO1Q92973 898 aaKnown RBP6.29□□□□□ -1.4
RFC4-204ENST00000417876 NEIL1Q96FI4 390 aaPredicted RBP6.29□□□□□ -1.4
RFC4-204ENST00000417876 RIPOR3Q96MK2 946 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 NDC1Q9BTX1 674 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 LRRC27Q9C0I9 530 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 BTBD1Q9H0C5 482 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 ADAM7Q9H2U9 754 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 KIAA1586Q9HCI6 787 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 MOCS1Q9NZB8 636 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 DMTF1Q9Y222 760 aa6.29□□□□□ -1.4
RFC4-204ENST00000417876 RASA4BC9J798 803 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 IFRD1O00458 451 aaPredicted RBP6.28□□□□□ -1.4
RFC4-204ENST00000417876 RASA4O43374 803 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 NCK2O43639 380 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 ARFIP2P53365 341 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 SUMO3P55854 103 aaPredicted RBP6.28□□□□□ -1.4
RFC4-204ENST00000417876 SOX8P57073 446 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 ZNF543Q08ER8 600 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 KIAA2012Q0VF49 1180 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 CNGA2Q16280 664 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 PABPC1LQ4VXU2 614 aaKnown RBP6.28□□□□□ -1.4
RFC4-204ENST00000417876 FAM83BQ5T0W9 1011 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 NT5DC1Q5TFE4 455 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 TCERG1LQ5VWI1 586 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 UBE3BQ7Z3V4 1068 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 SYT8Q8NBV8 401 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 VPS37AQ8NEZ2 397 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 LSM14BQ9BX40 385 aaKnown RBP6.28□□□□□ -1.4
RFC4-204ENST00000417876 C12orf65Q9H3J6 166 aaKnown RBP6.28□□□□□ -1.4
RFC4-204ENST00000417876 SARS2Q9NP81 518 aaKnown RBP6.28□□□□□ -1.4
RFC4-204ENST00000417876 PLCB1Q9NQ66 1216 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 SLC45A2Q9UMX9 530 aa6.28□□□□□ -1.4
RFC4-204ENST00000417876 ABHD14A-ACY1A0A1B0GW23 586 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 KCNC1P48547 511 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 PIK3CGP48736 1102 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 RAC3P60763 192 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 CCDC93Q567U6 631 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 EMC10Q5UCC4 262 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 TMEM151BQ8IW70 566 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 BRIX1Q8TDN6 353 aaKnown RBP6.27□□□□□ -1.41
RFC4-204ENST00000417876 MAML1Q92585 1016 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 TCF25Q9BQ70 676 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 TRIM54Q9BYV2 358 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 SLAMF7Q9NQ25 335 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 FBXO34Q9NWN3 711 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 SIDT1Q9NXL6 827 aaKnown RBP6.27□□□□□ -1.41
RFC4-204ENST00000417876 OAZ3Q9UMX2 235 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 SNX13Q9Y5W8 968 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 DUSP10Q9Y6W6 482 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 SMARCA4P51532 1647 aa6.27□□□□□ -1.41
RFC4-204ENST00000417876 MAPKBP1O60336 1514 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 A0A1W2PRX2 142 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 ISM1B1AKI9 464 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 KIAA0391O15091 583 aaKnown RBP6.26□□□□□ -1.41
RFC4-204ENST00000417876 TEX33O43247 280 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 SLC43A1O75387 559 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 SETSIPP0DME0 302 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 BRAFP15056 766 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 ATP5JP18859 108 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 EN2P19622 333 aaPredicted RBP6.26□□□□□ -1.41
RFC4-204ENST00000417876 CR2P20023 1033 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 TNFSF4P23510 183 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 PPP2CBP62714 309 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 PPP2CAP67775 309 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 ZNF568Q3ZCX4 644 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 LONRF3Q496Y0 759 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 C3orf38Q5JPI3 329 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 CIAPIN1Q6FI81 312 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 ERAP2Q6P179 960 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 ZNF529Q6P280 563 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 FAM111BQ6SJ93 734 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 TSHZ1Q6ZSZ6 1077 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 OR2C3Q8N628 320 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 RNF152Q8N8N0 203 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 BORCS6Q96GS4 357 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 ZNF512Q96ME7 567 aaPredicted RBP6.26□□□□□ -1.41
RFC4-204ENST00000417876 LRRC37BQ96QE4 947 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 MEGF9Q9H1U4 602 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 SMURF2Q9HAU4 748 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 ZNF287Q9HBT7 754 aa6.26□□□□□ -1.41
RFC4-204ENST00000417876 PIH1D1Q9NWS0 290 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms