RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 GADL1Q6ZQY3 521 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 USP30Q70CQ3 517 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PRIMA1Q86XR5 153 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 DENND1CQ8IV53 801 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 DRC7Q8IY82 874 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TTC8Q8TAM2 541 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ARL8AQ96BM9 186 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 AJUBAQ96IF1 538 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CDK5RAP3Q96JB5 506 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CDC5LQ99459 802 aaKnown RBP3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 RTFDC1Q9BY42 306 aaPredicted RBP3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TLR9Q9NR96 1032 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TDP1Q9NUW8 608 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PARPBPQ9NWS1 579 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PUF60Q9UHX1 559 aaKnown RBP3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 FEZ2Q9UHY8 353 aaPredicted RBP3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 NOB1Q9ULX3 412 aaKnown RBP3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 OAZ3Q9UMX2 235 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PTPN22Q9Y2R2 807 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CLIP1P30622 1438 aa3.25□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PMS2P1A4D2B8 440 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 VSTM5A8MXK1 200 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 H3BML4 177 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CDC14BO60729 498 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 IL18BPO95998 194 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 POU2F2P09086 479 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 VSIG10L2P0DP72 767 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 C5AR1P21730 350 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MCAMP43121 646 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 GPSM2P81274 684 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CDC42EP1Q00587 391 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CREMQ03060 361 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TCIRG1Q13488 830 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 NOMO1Q15155 1222 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 GPR162Q16538 588 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ATAT1Q5SQI0 421 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MFSD5Q6N075 450 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MICALCLQ6ZW33 695 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TAS1R1Q7RTX1 841 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 DAAM2Q86T65 1068 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ADGRG3Q86Y34 549 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PLA2G15Q8NCC3 412 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PPP1R14CQ8TAE6 165 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SNX33Q8WV41 574 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 RIN2Q8WYP3 895 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TSR2Q969E8 191 aaKnown RBP3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 RGMAQ96B86 450 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 COA7Q96BR5 231 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MVB12AQ96EY5 273 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 LRGUKQ96M69 825 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 BBC3Q96PG8 261 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 DPYSL5Q9BPU6 564 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SENP6Q9GZR1 1112 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 KATNBL1Q9H079 304 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ZNF700Q9H0M5 742 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 EPC1Q9H2F5 836 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SLC6A15Q9H2J7 730 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 BCO1Q9HAY6 547 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 OBP2AQ9NY56 170 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 EVLQ9UI08 416 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 DNAI1Q9UI46 699 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PCDHGA2Q9Y5H1 932 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 EEA1Q15075 1411 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 FMN1Q68DA7 1419 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 FAM135AQ9P2D6 1515 aa3.24□□□□□ -1.89
RNU6-1140P-201ENST00000410517 FRMPD2Q68DX3 1309 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PRXQ9BXM0 1461 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 LTBP4Q8N2S1 1624 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 IKBKBO14920 756 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ARHGAP6O43182 974 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 AP1G1O43747 822 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ALDH1A2O94788 518 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 RHOBTB3O94955 611 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 LY86O95711 162 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 GNAI3P08754 354 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 IFIT2P09913 472 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ALAS1P13196 640 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 GSPT1P15170 499 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PDCP20941 246 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 LPOP22079 712 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SMARCA1P28370 1054 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 RPS19P39019 145 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 KIR2DL3P43628 341 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MRE11P49959 708 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 NPEPPSP55786 919 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 GNAI1P63096 354 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CCT2P78371 535 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MXRA7P84157 204 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SATB1Q01826 763 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 IFIT5Q13325 482 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SP140Q13342 867 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TRIM25Q14258 630 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SAFBQ15424 915 aaKnown RBP eCLIP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MST1LQ2TV78 715 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SLC44A4Q53GD3 710 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 DARS2Q6PI48 645 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 UNQ6494/PRO21346Q6UXR6 183 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 KSR2Q6VAB6 950 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms