RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 KLHL40Q2TBA0 621 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 TIGD5Q53EQ6 642 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 WDR49Q8IV35 697 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 TMC2Q8TDI7 906 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 FAM212AQ96EL1 285 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 DACH1Q9UI36 760 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 PRG3Q9Y2Y8 225 aaPredicted RBP19.14■□□□□ 0.65
CTNS-203ENST00000399306 MTCH2Q9Y6C9 303 aa19.14■□□□□ 0.65
CTNS-203ENST00000399306 SF3B1O75533 1304 aaKnown RBP eCLIP19.14■□□□□ 0.654e-12■■■■■ 275.7
CTNS-203ENST00000399306 MYO7AQ13402 2215 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 ANO9A1A5B4 782 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 FSD2A1L4K1 749 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 BIN1O00499 593 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 PODXLO00592 558 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 SLC16A3O15427 465 aaKnown RBP19.13■□□□□ 0.65
CTNS-203ENST00000399306 TADA2AO75478 443 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 NFICP08651 508 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 CD44P16070 742 aaKnown RBP19.13■□□□□ 0.65
CTNS-203ENST00000399306 PSMC2P35998 433 aaKnown RBP19.13■□□□□ 0.65
CTNS-203ENST00000399306 CLCNKBP51801 687 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 CAMK1Q14012 370 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 DUOXA2Q1HG44 320 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 INTS8Q75QN2 995 aaKnown RBP19.13■□□□□ 0.65
CTNS-203ENST00000399306 TMEM173Q86WV6 379 aaPredicted RBP19.13■□□□□ 0.65
CTNS-203ENST00000399306 EFCAB13Q8IY85 973 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 PPP2R3CQ969Q6 453 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 C18orf25Q96B23 403 aaPredicted RBP19.13■□□□□ 0.65
CTNS-203ENST00000399306 CEP63Q96MT8 703 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 FNBP1Q96RU3 617 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 HERC2P3Q9BVR0 1158 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 PDE11AQ9HCR9 933 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 ALG13Q9NP73 1137 aaKnown RBP19.13■□□□□ 0.65
CTNS-203ENST00000399306 ITGA11Q9UKX5 1188 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 STXBP5LQ9Y2K9 1186 aa19.13■□□□□ 0.65
CTNS-203ENST00000399306 RFXAPO00287 272 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 IKBKBO14920 756 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 B3GAT3O94766 335 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 KIF4AO95239 1232 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 CTSAP10619 480 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 FOSL2P15408 326 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 NLRP12P59046 1061 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 PAK1Q13153 545 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 SKOR2Q2VWA4 1001 aaPredicted RBP19.12■□□□□ 0.65
CTNS-203ENST00000399306 ANKRD40Q6AI12 368 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 ISM2Q6H9L7 571 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 TTI2Q6NXR4 508 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 FUT10Q6P4F1 479 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 PARD3BQ8TEW8 1205 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 BCL7CQ8WUZ0 217 aaPredicted RBP19.12■□□□□ 0.65
CTNS-203ENST00000399306 MYLIPQ8WY64 445 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 ANKRD36BP1Q96IX9 119 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 CGRRF1Q99675 332 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 PAAF1Q9BRP4 392 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 ZBP1Q9H171 429 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 CHST7Q9NS84 486 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 INTS13Q9NVM9 706 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 TUBGCP4Q9UGJ1 667 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 ATG2AQ2TAZ0 1938 aa19.12■□□□□ 0.65
CTNS-203ENST00000399306 ARHGEF37A1IGU5 675 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 PIRO00625 290 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 DNAJB1P25685 340 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 ERCC5P28715 1186 aaPredicted RBP19.11■□□□□ 0.65
CTNS-203ENST00000399306 PNPLA4P41247 253 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 AARSP49588 968 aaKnown RBP eCLIP19.11■□□□□ 0.65
CTNS-203ENST00000399306 USP41Q3LFD5 358 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 PDXDC1Q6P996 788 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 VPS52Q8N1B4 723 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 RDH13Q8NBN7 331 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 NELFBQ8WX92 580 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 NSUN3Q9H649 340 aaKnown RBP19.11■□□□□ 0.65
CTNS-203ENST00000399306 GOLGA2P5Q9HBQ8 144 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 DPP3Q9NY33 737 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 RWDD2AQ9UIY3 292 aa19.11■□□□□ 0.65
CTNS-203ENST00000399306 NCK2O43639 380 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 AKAP3O75969 853 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 LETM1O95202 739 aaPredicted RBP19.1■□□□□ 0.65
CTNS-203ENST00000399306 FGFR1OPO95684 399 aaKnown RBP19.1■□□□□ 0.65
CTNS-203ENST00000399306 C1RP00736 705 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 TNNC2P02585 160 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 TMEM191BP0C7N4 346 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 CASP4P49662 377 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 WNT7BP56706 349 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 CREMQ03060 361 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 SPAG1Q07617 926 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 SMC1AQ14683 1233 aaKnown RBP19.1■□□□□ 0.65
CTNS-203ENST00000399306 C9orf57Q5W0N0 161 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 CEP135Q66GS9 1140 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 CD300LGQ6UXG3 332 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.1■□□□□ 0.65
CTNS-203ENST00000399306 FILIP1Q7Z7B0 1213 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 FAM186BQ8IYM0 893 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 LRRC52Q8N7C0 313 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 NOC3LQ8WTT2 800 aaKnown RBP19.1■□□□□ 0.65
CTNS-203ENST00000399306 SUSD3Q96L08 255 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 CDCA3Q99618 268 aaPredicted RBP19.1■□□□□ 0.65
CTNS-203ENST00000399306 VN1R3Q9BXE9 311 aa19.1■□□□□ 0.65
CTNS-203ENST00000399306 SCN1AP35498 2009 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 SYN3O14994 580 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 GNA14O95837 355 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 EPB41P11171 864 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms