RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 TYRO3Q06418 890 aa18.8■□□□□ 0.6
CSNK1D-204ENST00000398519 SURF1Q15526 300 aa18.8■□□□□ 0.6
CSNK1D-204ENST00000398519 LMBRD2Q68DH5 695 aaPredicted RBP18.8■□□□□ 0.6
CSNK1D-204ENST00000398519 CSGALNACT2Q8N6G5 542 aa18.8■□□□□ 0.6
CSNK1D-204ENST00000398519 BEST2Q8NFU1 509 aa18.8■□□□□ 0.6
CSNK1D-204ENST00000398519 GDPD5Q8WTR4 605 aa18.8■□□□□ 0.6
CSNK1D-204ENST00000398519 IGSF21Q96ID5 467 aa18.8■□□□□ 0.6
CSNK1D-204ENST00000398519 POP1Q99575 1024 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-204ENST00000398519 MKNK1Q9BUB5 465 aa18.8■□□□□ 0.6
CSNK1D-204ENST00000398519 ANO10Q9NW15 660 aa18.8■□□□□ 0.6
CSNK1D-204ENST00000398519 SYCE3A1L190 88 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 PODXLO00592 558 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 SLC16A3O15427 465 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 LETM1O95202 739 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 KIF4AO95239 1232 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 ERCC5P28715 1186 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 LRPAP1P30533 357 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 PLCB3Q01970 1234 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 GPM6BQ13491 265 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 C11orf57Q6ZUT1 292 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 WDR49Q8IV35 697 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 C3orf58Q8NDZ4 430 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 OR5B17Q8NGF7 314 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 PARD3BQ8TEW8 1205 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 BORCS6Q96GS4 357 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 CEP63Q96MT8 703 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 FNBP1Q96RU3 617 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 CGRRF1Q99675 332 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 MTMR12Q9C0I1 747 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 PRDM12Q9H4Q4 367 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 ALG13Q9NP73 1137 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 INTS13Q9NVM9 706 aa18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-204ENST00000398519 LRRIQ3A6PVS8 624 aaPredicted RBP18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 GRM6O15303 877 aa18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 LPXNO60711 386 aa18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 EPB41P11171 864 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 RPL9P32969 192 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 DLG4P78352 724 aa18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 CLDN10P78369 228 aa18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 CT47A1Q5JQC4 288 aaPredicted RBP18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 INTS8Q75QN2 995 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 HASPINQ8TF76 798 aa18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 DDX27Q96GQ7 796 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 TMEM169Q96HH4 297 aa18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 FUCA2Q9BTY2 467 aa18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 COLEC11Q9BWP8 271 aa18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 VN1R3Q9BXE9 311 aa18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 DPP3Q9NY33 737 aa18.78■□□□□ 0.6
CSNK1D-204ENST00000398519 TNNI1P19237 187 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 DNAJB1P25685 340 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 BFSP1Q12934 665 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 ZSCAN23Q3MJ62 389 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 C1orf220Q5T0J3 134 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 DCLRE1AQ6PJP8 1040 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 CD300LGQ6UXG3 332 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 FILIP1Q7Z7B0 1213 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 C1orf127Q8N9H9 656 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 SPPL3Q8TCT6 385 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 TMC2Q8TDI7 906 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 CACTINQ8WUQ7 758 aaKnown RBP18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 ZNF516Q92618 1163 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 SRRTQ9BXP5 876 aaKnown RBP18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 DNAJC25Q9H1X3 360 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 ADAM28Q9UKQ2 775 aa18.77■□□□□ 0.6
CSNK1D-204ENST00000398519 TMEM189-UBE2V1I3L0A0 370 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 PPEF2O14830 753 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 B3GAT3O94766 335 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 EFEMP2O95967 443 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 TMEM191BP0C7N4 346 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 VAMP7P51809 220 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 MCCD1P59942 119 aaPredicted RBP18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 KRT17Q04695 432 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 DUOXA2Q1HG44 320 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 C9orf57Q5W0N0 161 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 SCARA3Q6AZY7 606 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 DEFB123Q8N688 67 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 CXorf38Q8TB03 319 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 POF1BQ8WVV4 589 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 ANKRD36BP1Q96IX9 119 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 ANO9A1A5B4 782 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 PIRO00625 290 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 TADA2AO75478 443 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 ITGB3P05106 788 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 TRIM49P0CI25 452 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 TRIM49CP0CI26 452 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 KRT13P13646 458 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 ENPEPQ07075 957 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 CAMK1Q14012 370 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 DDX53Q86TM3 631 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 SIX4Q9UIU6 781 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 ITGA11Q9UKX5 1188 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 LZTS1Q9Y250 596 aa18.76■□□□□ 0.59
CSNK1D-204ENST00000398519 TNNC2P02585 160 aa18.75■□□□□ 0.59
CSNK1D-204ENST00000398519 CCDC192P0DO97 292 aa18.75■□□□□ 0.59
CSNK1D-204ENST00000398519 UBE3AQ05086 875 aa18.75■□□□□ 0.59
CSNK1D-204ENST00000398519 ANO6Q4KMQ2 910 aa18.75■□□□□ 0.59
CSNK1D-204ENST00000398519 FUT10Q6P4F1 479 aa18.75■□□□□ 0.59
CSNK1D-204ENST00000398519 USP37Q86T82 979 aa18.75■□□□□ 0.59
CSNK1D-204ENST00000398519 RNF168Q8IYW5 571 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms