RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 BFSP1Q12934 665 aa27.48■■□□□ 1.99
HOMER3-202ENST00000392351 TMC2Q8TDI7 906 aa27.48■■□□□ 1.99
HOMER3-202ENST00000392351 CACTINQ8WUQ7 758 aaKnown RBP27.48■■□□□ 1.99
HOMER3-202ENST00000392351 ARNTL2Q8WYA1 636 aa27.48■■□□□ 1.99
HOMER3-202ENST00000392351 UROC1Q96N76 676 aa27.48■■□□□ 1.99
HOMER3-202ENST00000392351 MTMR12Q9C0I1 747 aa27.48■■□□□ 1.99
HOMER3-202ENST00000392351 NAT10Q9H0A0 1025 aaKnown RBP27.48■■□□□ 1.99
HOMER3-202ENST00000392351 ZNF576Q9H609 170 aa27.48■■□□□ 1.99
HOMER3-202ENST00000392351 INTS13Q9NVM9 706 aa27.48■■□□□ 1.99
HOMER3-202ENST00000392351 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.48■■□□□ 1.99
HOMER3-202ENST00000392351 SZT2Q5T011 3432 aa27.47■■□□□ 1.99
HOMER3-202ENST00000392351 LRRIQ3A6PVS8 624 aaPredicted RBP27.47■■□□□ 1.99
HOMER3-202ENST00000392351 VAMP7P51809 220 aa27.47■■□□□ 1.99
HOMER3-202ENST00000392351 DLG4P78352 724 aa27.47■■□□□ 1.99
HOMER3-202ENST00000392351 CCDC40Q4G0X9 1142 aa27.47■■□□□ 1.99
HOMER3-202ENST00000392351 USP37Q86T82 979 aa27.47■■□□□ 1.99
HOMER3-202ENST00000392351 TMEM173Q86WV6 379 aaPredicted RBP27.47■■□□□ 1.99
HOMER3-202ENST00000392351 OR5B17Q8NGF7 314 aa27.47■■□□□ 1.99
HOMER3-202ENST00000392351 BORCS6Q96GS4 357 aa27.47■■□□□ 1.99
HOMER3-202ENST00000392351 ANKRD36BP1Q96IX9 119 aa27.47■■□□□ 1.99
HOMER3-202ENST00000392351 PLVAPQ9BX97 442 aa27.47■■□□□ 1.99
HOMER3-202ENST00000392351 DPP3Q9NY33 737 aa27.47■■□□□ 1.99
HOMER3-202ENST00000392351 TMEM265A0A087WTH1 108 aa27.46■■□□□ 1.99
HOMER3-202ENST00000392351 CARNS1A5YM72 827 aa27.46■■□□□ 1.99
HOMER3-202ENST00000392351 C5orf67F2Z3F1 127 aa27.46■■□□□ 1.99
HOMER3-202ENST00000392351 F8W810 466 aa27.46■■□□□ 1.99
HOMER3-202ENST00000392351 PPM1AP35813 382 aa27.46■■□□□ 1.99
HOMER3-202ENST00000392351 UPP1Q16831 310 aa27.46■■□□□ 1.99
HOMER3-202ENST00000392351 SLC39A11Q8N1S5 342 aa27.46■■□□□ 1.99
HOMER3-202ENST00000392351 FBXO22Q8NEZ5 403 aa27.46■■□□□ 1.99
HOMER3-202ENST00000392351 ENOX1Q8TC92 643 aaKnown RBP27.46■■□□□ 1.99
HOMER3-202ENST00000392351 SPG21Q9NZD8 308 aa27.46■■□□□ 1.99
HOMER3-202ENST00000392351 ARMCX3Q9UH62 379 aaPredicted RBP27.46■■□□□ 1.99
HOMER3-202ENST00000392351 COL4A4P53420 1690 aaPredicted RBP27.46■■□□□ 1.99
HOMER3-202ENST00000392351 SCN1AP35498 2009 aa27.45■■□□□ 1.99
HOMER3-202ENST00000392351 PODXLO00592 558 aa27.45■■□□□ 1.99
HOMER3-202ENST00000392351 DUOXA2Q1HG44 320 aa27.45■■□□□ 1.99
HOMER3-202ENST00000392351 KLHL23Q8NBE8 558 aa27.45■■□□□ 1.99
HOMER3-202ENST00000392351 DDX27Q96GQ7 796 aaKnown RBP27.45■■□□□ 1.99
HOMER3-202ENST00000392351 KIF4AO95239 1232 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 GNA14O95837 355 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 TNNC2P02585 160 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 RB1P06400 928 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 TRIM49P0CI25 452 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 TRIM49CP0CI26 452 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 LRPAP1P30533 357 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 RPL9P32969 192 aaKnown RBP27.44■■□□□ 1.98
HOMER3-202ENST00000392351 CLDN10P78369 228 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 FRMD5Q7Z6J6 570 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 HASPINQ8TF76 798 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 BCL7CQ8WUZ0 217 aaPredicted RBP27.44■■□□□ 1.98
HOMER3-202ENST00000392351 IGSF21Q96ID5 467 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 C11orf84Q9BUA3 381 aaPredicted RBP27.44■■□□□ 1.98
HOMER3-202ENST00000392351 COLEC11Q9BWP8 271 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 TTYH1Q9H313 450 aaPredicted RBP27.44■■□□□ 1.98
HOMER3-202ENST00000392351 METTL14Q9HCE5 456 aaKnown RBP27.44■■□□□ 1.98
HOMER3-202ENST00000392351 MARCH5Q9NX47 278 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 NFE2L3Q9Y4A8 694 aa27.44■■□□□ 1.98
HOMER3-202ENST00000392351 FGF18O76093 207 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 B3GAT3O94766 335 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 MYL5Q02045 173 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 ENPEPQ07075 957 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 DCAF17Q5H9S7 520 aaPredicted RBP27.43■■□□□ 1.98
HOMER3-202ENST00000392351 ZNF697Q5TEC3 545 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 TCERG1LQ5VWI1 586 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 C1orf127Q8N9H9 656 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 ZNF516Q92618 1163 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 TMEM169Q96HH4 297 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 THAP9Q9H5L6 903 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 ITGB1P05556 798 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 C1orf220Q5T0J3 134 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 C3orf58Q8NDZ4 430 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 CNOT6LQ96LI5 555 aaKnown RBP27.43■■□□□ 1.98
HOMER3-202ENST00000392351 ADAM28Q9UKQ2 775 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 ITGA11Q9UKX5 1188 aa27.43■■□□□ 1.98
HOMER3-202ENST00000392351 EPOPA6NHQ4 379 aa27.42■■□□□ 1.98
HOMER3-202ENST00000392351 IKBKBO14920 756 aa27.42■■□□□ 1.98
HOMER3-202ENST00000392351 ITGB3P05106 788 aa27.42■■□□□ 1.98
HOMER3-202ENST00000392351 ZNF165P49910 485 aa27.42■■□□□ 1.98
HOMER3-202ENST00000392351 HSP90AA4PQ58FG1 418 aa27.42■■□□□ 1.98
HOMER3-202ENST00000392351 C9orf57Q5W0N0 161 aa27.42■■□□□ 1.98
HOMER3-202ENST00000392351 DCLRE1AQ6PJP8 1040 aa27.42■■□□□ 1.98
HOMER3-202ENST00000392351 IRF2BP1Q8IU81 584 aa27.42■■□□□ 1.98
HOMER3-202ENST00000392351 CREBRFQ8IUR6 639 aa27.42■■□□□ 1.98
HOMER3-202ENST00000392351 AOPEPQ8N6M6 819 aa27.42■■□□□ 1.98
HOMER3-202ENST00000392351 ALG13Q9NP73 1137 aaKnown RBP27.42■■□□□ 1.98
HOMER3-202ENST00000392351 PPEF2O14830 753 aa27.41■■□□□ 1.98
HOMER3-202ENST00000392351 TADA2AO75478 443 aa27.41■■□□□ 1.98
HOMER3-202ENST00000392351 KRT19P08727 400 aa27.41■■□□□ 1.98
HOMER3-202ENST00000392351 IGFBP6P24592 240 aaPredicted RBP27.41■■□□□ 1.98
HOMER3-202ENST00000392351 AP3M2P53677 418 aa27.41■■□□□ 1.98
HOMER3-202ENST00000392351 MARSP56192 900 aaKnown RBP27.41■■□□□ 1.98
HOMER3-202ENST00000392351 TRAPPC11Q7Z392 1133 aa27.41■■□□□ 1.98
HOMER3-202ENST00000392351 GDPD5Q8WTR4 605 aa27.41■■□□□ 1.98
HOMER3-202ENST00000392351 BPIFA3Q9BQP9 254 aa27.41■■□□□ 1.98
HOMER3-202ENST00000392351 MMRN2Q9H8L6 949 aa27.41■■□□□ 1.98
HOMER3-202ENST00000392351 SAMSN1Q9NSI8 373 aaKnown RBP27.41■■□□□ 1.98
HOMER3-202ENST00000392351 ANO9A1A5B4 782 aa27.4■■□□□ 1.98
HOMER3-202ENST00000392351 H3BNC9 293 aa27.4■■□□□ 1.98
HOMER3-202ENST00000392351 TMEM189-UBE2V1I3L0A0 370 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms